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Information for unigene UN47058

FASTA Sequence
Unigene ID: UN47058Length: 777 SSR 
ACTTAATAGCAAAGTTCAATTTTTATTAAACAAAGTGTTCATGCTAATCCATATAATATATGTATGTAAACATTACAAAATATTCA
AAGAATAAGAATGTGGCGTTACAAAAAAAACAGAATCAAACGATATTTCACCAAAAAAAAAACTGTTCACTTCCTTTGCTTTTTGT
TGTTGTTGTTGTGTGAATGTATAACTTAACAATCATCCTGATTCATCTTCAAAACATGATGATAATGAATGTGGCTCTACCTTTGG
ATCTGGGACGTAGTCTGAGCTAGAACAATGTCAGAAGTCGTCAGAGTACCAGATTCATCGATATCAAGCTGCTCAAACTCCTCCAT
GATCCCAGCTATATCTTTCTCATCAATCTTCCCCATCTCTATCAGTTTATACACAATAAACTCTGCAGCTCCAACAACTCCATCTT
CATCAAGATCAGCAGCTTCGAGATCATTATTAGTAATCCTCCTACTCAAAACCCATTTCACCAACTCCCTCTGTTTAATCTCCGCA
TTCAACTCAGCCACATAAAGAAAAAACTGAGCCAAACACACAGTACTCGTCAATATCCAAAACACAGCGAACACCCTCCCGGTCCC
CGAGTTAAAACTCTTGTCCCCATACCCCAACGTAGTCACCGTGGAGCACACGCAATAGAAAGCTTCCACAACCGGCATCTTCTCGT
ACGCCACAAGAAAAACCGTACCGGTACAGAAGAGCACCACGAGGACAAGGAACGTGACGTAGCATTTGTACCTCAGCTTGTTGGTA
TGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864404 outward rectifying potassium channel KCO1 [Arabidopsis lyrata subsp. lyrata]7985e-083
CAA65988 outward rectifying potassium channel KCO1 [Arabidopsis thaliana]7913e-082
NP_200374 calcium-activated outward-rectifying potassium channel 1 [Arabidopsis thaliana]7879e-082
AAM64705 outward rectifying potassium channel KCO [Arabidopsis thaliana]7806e-081
AAF97863 outward-rectifying potassium channel KCO1 [Eucalyptus camaldulensis]6202e-062

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBL1 Calcium-activated outward-rectifying potassium channel 17874e-083
Q9S6Z8 Probable calcium-activated outward-rectifying potassium channel 5, chloroplastic3108e-028
Q9SVV6 Probable calcium-activated outward-rectifying potassium channel 62982e-026
Q9FL25 Probable calcium-activated outward-rectifying potassium channel 22883e-025
Q9FWX6 Putative outward-rectifying potassium channel 41801e-012

TrEMBL top hits (Blast detail)Scoree value
Q0WNY4 Outward rectifying potassium channel KCO7876e-082
Q9LLM5 Outward-rectifying potassium channel KCO16201e-062
A7BK76 Potassium channel6139e-062
Q9AR58 K+ channel protein6139e-062
Q9ZP53 K+ channel protein6083e-061

Arabidopsis top hits (Blast detail)Scoree value
AT5G55630.1 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel7883e-084
AT5G55630.2 ATKCO1; calcium-activated potassium channel/ ion channel/ outward rectifier potassium channel7883e-084
AT4G01840.1 KCO5 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 5); outward rectifier potassium channel3108e-029
AT4G18160.1 KCO6; outward rectifier potassium channel2982e-027
AT5G46370.1 KCO2 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 2); calcium ion binding / outward rectifier potassium channel2883e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  100%

Unigene MembersMember information