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Information for unigene UN47070

FASTA Sequence
Unigene ID: UN47070Length: 707 SSR 
GGACTTCTCTTTTAATTTTATCCGGTCCGGATCTCTCTCTCTCTCTCTCCGACACAGACACACTCTCTCTCTCTCTATATCTCTTC
GTGTAAGACACTGGTGTGACTGTTTTTTTAAGGCGGGGAAAATGTCTGGAAAAGGAGCGAAAGGGCCGATAATGGGGAAATCAAGC
GGTAACGACAAGGACAAAGACAAGAAGAAACCCACTACTCGCTCTTCTCGTGCTGGTCTTCAGTTTCCAGTTGGGAGAGTCCACAG
ACTGCTGAAAGGAAGGTCAACCGCTCACGGACGCGTCGGCGCAACCGCCGCGGTTTACACGGCCGCTATTCTGGAGTATCTGACCG
CAGAAGTCTTGGAGCTCGCTGGTAACGCGAGCAAGGATCTTAAAGTGAAGCGTATCACACCCAGGTATCTTCAGCTCGCTATTCGC
GGTGACGAAGAGCTCGATACTCTCATCAAAGGAACTATTGCTGGTGGTGGTGTCATTCCTCATATTCACAAGTCCCTCATCAACAA
ATCTGGCTAAGAATAGTTCCTCTCTTTCTCTACTTCATCATCTCTGTCTCTTTTGGATCTTTTTGTTTGTTAAATAGTCGTCTATG
TTTTAAGATACTAGTGGAGATACTGTTTGTTTGTTTGTTTGTTTAAGACTCACGTGTGACTTGTTTCCCTCGTTTCTGATTAGTGT
TTTGGTGTTTGTTCATGTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002885097 hypothetical protein ARALYDRAFT_341690 [Arabidopsis lyrata subsp. lyrata]6327e-064
NP_175683 histone H2A protein 9 [Arabidopsis thaliana]6165e-062
XP_002529367 histone h2a, putative [Ricinus communis]5923e-059
XP_002324843 histone 2 [Populus trichocarpa]5861e-058
XP_002284738 PREDICTED: hypothetical protein [Vitis vinifera]5852e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9C944 Probable histone H2A variant 36162e-063
O23628 Histone H2A variant 15463e-055
Q8H7Y8 Probable histone H2A variant 15411e-054
Q8S857 Probable histone H2A variant 25356e-054
Q84MP7 Probable histone H2A variant 35284e-053

TrEMBL top hits (Blast detail)Scoree value
B9STP8 Histone H2A5922e-059
B9IKT5 Histone H2A5861e-058
C6SZ77 Histone H2A5851e-058
A9PIK3 Histone H2A5842e-058
A9NMZ1 Histone H2A5823e-058

Arabidopsis top hits (Blast detail)Scoree value
AT1G52740.1 HTA9 (HISTONE H2A PROTEIN 9); DNA binding6172e-064
AT3G54560.1 HTA11; DNA binding5463e-056
AT2G38810.1 HTA8 (HISTONE H2A 8); DNA binding5176e-053
AT2G38810.3 HTA8 (HISTONE H2A 8); DNA binding5176e-053
AT2G38810.2 HTA8 (HISTONE H2A 8); DNA binding5176e-053

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information