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Information for unigene UN47076

FASTA Sequence
Unigene ID: UN47076Length: 536 SSR 
GGACTTCATCATTCCTCACACTGTTTCTCTTTCCTCCTCCGTCTGTCTCGTCGCCTCTGCAGATACTCCGGCAAGCTTATTTTTTT
CGTCGGATCAAAGAAACAGAGAGAGAGATGGCGTCAAGGAGTTACGTTGCTGGTTTCGCGTTATTCACATTTGTTTTCGCCGTCAT
CTCGTCTCTCGTCGGTGCTCAATCTCTAGCTCCCGCTCCTGCTCCGACTAGTGATGGGACATCGATAGATCAAGGGATTGCATATC
TGCTAATGGTGGTGGCCTTGGTGCTGACTTACCTCATTCATCCTCTAGATGCATCTTCTTCCTACAGCTTCTTCTGATTTGTCTCT
TCATTTTCAGTTTTTGTTTTTTTGTGTGGATAAAAATCCCGAGTATGGTTATTAATTTGCTCATGATTTATGTTTTTTTGTCTTGA
TTATGATCGTGGATTCGTGATGATGATGACTCCTGGTGATTGAATCTCTGTTGTTTTCCATCAGATTATGATGATGATGATGATGA
TTCCTTTTAAGAAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566070 arabinogalactan protein 16 [Arabidopsis thaliana]3251e-028
NP_191723 arabinogalactan protein 20 [Arabidopsis thaliana]2929e-025
XP_002878394 hypothetical protein ARALYDRAFT_907707 [Arabidopsis lyrata subsp. lyrata]2452e-019
XP_002532657 conserved hypothetical protein [Ricinus communis]2417e-019
XP_002320846 hypothetical protein POPTRDRAFT_572354 [Populus trichocarpa]2345e-018

Swiss-Prot top hits (Blast detail)Scoree value
O82337 Arabinogalactan peptide 163257e-030
Q9M373 Arabinogalactan peptide 202925e-026
Q9FK16 Arabinogalactan peptide 221643e-011

TrEMBL top hits (Blast detail)Scoree value
B9T338 Putative uncharacterized protein2415e-019
A9PBL3 Putative uncharacterized protein2343e-018
B4FIH4 Putative uncharacterized protein2291e-017
A5BTA7 Putative uncharacterized protein2236e-017
B6SPA0 AGP202228e-017

Arabidopsis top hits (Blast detail)Scoree value
AT2G46330.1 AGP16 (ARABINOGALACTAN PROTEIN 16)3266e-031
AT3G61640.1 AGP202934e-027
AT5G24105.1 AGP41 (ARABINOGALACTAN-PROTEIN 41)1886e-015
AT5G53250.1 AGP22 (ARABINOGALACTAN PROTEIN 22)1643e-012
AT2G46330.2 AGP16 (ARABINOGALACTAN PROTEIN 16)1591e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

Unigene MembersMember information