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Information for unigene UN47100
| FASTA Sequence |
| Unigene ID: UN47100 | Length: 844 |
SSR | | GGGACTCTCTCTTTCCCACCGCAAACGATAACAATGGGCGCTAAAGCTAAGAAAGCTCTGAAGAAGAACATGAAGAAGATCTCAGC
TTCGGCTGCTGCTGCTGCTGCTGCTCCCTCTCAGCTTGCTGTTCCCCAGAACCAGAAACCATCTGCTGATTTTTTGCCACTAGGAG
GAGGTCCAGCTCGAAAAGCACCAGTGAGCAAACCTGTTGAAAGTAAAGCCACAGTGCTATACATCGGTCGTCTCCCTCATGGCTTC
TACGAGACTGAGATTGAAGCTTTCTTCACGCAGTTTGGAACAGTCAAGAGAGTTAGAGTCGCCCGAAACAAAAAGACTGGGAAGTC
AAAGCATTTTGGGTTCATACAGTTTGAGGACCCTGAGGTGGCGGAAATTGCAGCGGGTGCAATGAATGACTATTTGCTCGAGCACA
TGCTTCAAGTCCGTGTCATTCCACCTGAGCATGTTAAACCCAATCTGTGGAAAGGGTTTAAAAGTCAGTACAAACCAGTGGATTGG
GTTCAGATCGAGCGTAAACAACATAACAAGGAAAGGACATTGGAAGAGCATAGGAAAATGTTGCACAAGGTTGTGAAACGGGATCA
GAAAAGGAGAAAGAGAATTGAAGCTGCTGGAATACAATATCAATGCCCTGAGCTTGTTGGAAATACACAGCCATTACCTAATAAGA
TCAAGTTTAGTGAAACTAGCTAGGAACCTCAGAAGCTGTGGGACACACATTTTCGATAAGATAATTTTGGAATAGGATCTTGTTTT
GTTGTACTTTTGACATGGGATCCAAATCTAAACTTTTTTTAAAGCATCTATTATTGCAATTAAAATTTCG
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002871104 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 959 | 1e-101 |
| NP_196080 RNA recognition motif-containing protein [Arabidopsis thaliana] | 924 | 1e-097 |
| XP_002316513 predicted protein [Populus trichocarpa] | 699 | 2e-071 |
| XP_002530883 poly-A binding protein, putative [Ricinus communis] | 691 | 1e-070 |
| ABB87134 RNA binding protein-like protein [Solanum tuberosum] | 686 | 5e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74978 Uncharacterized RNA-binding protein C1827.05c | 310 | 9e-028 |
| Q3SZM1 MKI67 FHA domain-interacting nucleolar phosphoprotein | 306 | 3e-027 |
| Q8JIY8 MKI67 FHA domain-interacting nucleolar phosphoprotein | 297 | 3e-026 |
| Q6GL69 MKI67 FHA domain-interacting nucleolar phosphoprotein-like | 293 | 9e-026 |
| Q7SYS2 MKI67 FHA domain-interacting nucleolar phosphoprotein-like | 275 | 1e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LZ65 AT5g04600/T32M21_200 | 924 | 9e-098 |
| B9HW06 Predicted protein | 699 | 1e-071 |
| B9SY14 Poly-A binding protein, putative | 691 | 1e-070 |
| Q2VCH8 RNA binding protein-like protein | 686 | 4e-070 |
| Q8SAB6 RNA binding protein | 631 | 9e-064 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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