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Information for unigene UN47119

FASTA Sequence
Unigene ID: UN47119Length: 916 SSR 
GGGGTTCTTTCTTTCTCTCCCTCAACGATTCTGTGTTTCTCTCAACCTCTCCACTTCACTACGCATCAAAACAACTCCCCTACAAA
AACCCTAACCCCTCTCTCTCATCTCTCCTCCTCTTCTTCGCCGAGCAGAGCAGCAGCAGCAGCAGCCATGGATGCCAAAGAAGCCT
CCACCACCGATCTGAAGTGCCCGAGAGAGGAGGACGATAACGCCGCCGCCGCTTCCATGGAGACAGAGAACGGAGATCAGACAAAG
GAGCTTGCTTGTTTCTCCTCTGTGATTCCCGGATGGTTCTCTGAGATGAGTCCCATTGTGGCCAGGAGAGGCAAACGCTTTGAAGG
TTGAGAAGGTTTTGTTTCAAGAAGATGATCACTCATCTTCGTCCATTCATCCAACTCACGGAGAGAGACGAGTGTGATTATCAGGA
GATGATCACTCATCTTCCTTTGTGCTCTATCCCTAACCCAAAAAGGTACACTGTCACACGTTCTTACCATTTATGGATCAATAGAT
ATGAAGGTTTCAATTTGTCAATGTCTCTGTCTCTTGTGTGGTCTCAAATGAATTGATTGTTTTTCTTGTCTGAGTTGAATAGATAG
ATTAGCTTCTCGTCTCAATTGATTCCTTGATCTATTACTCTTTTTTTTTCCTGTGTATTTGTCTGTTGAGTTCCATGGATCAAGGA
CGCTGAGGAAGGATCGTGAAAGGAGAGGATGACATTTACTGGATGGCATTTACTAGAGCAATATAGGTTTATTAATAGAATGGAGC
ATACGTGTGGTGTTGGAGCATGCGTGTGGTGTTGGAGCATCCATTTTCTGTTGTGTTTTGTTAGTTTCTATCACGGATTGTACTTG
TTTCCTTTTATCTTGTTTGCTTTTATCACGGATTGTAGAGTGCTTATGCTTCTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890597 hypothetical protein ARALYDRAFT_889925 [Arabidopsis lyrata subsp. lyrata]2799e-023
NP_173794 spermidine synthase 1 [Arabidopsis thaliana]2691e-021
NP_973900 spermidine synthase 1 [Arabidopsis thaliana]2691e-021
Q9ZUB3 RecName: Full=Spermidine synthase 1; Short=SPDSY 1; AltName: Full=Putrescine aminopropyltransferase 12323e-017
1XJ5 Chain A, X-Ray Structure Of Spermidine Synthase From Arabidopsis Thaliana Gene At1g238202143e-015

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUB3 Spermidine synthase 12321e-018
Q96556 Spermidine synthase 11461e-008
O48658 Spermidine synthase 11461e-008
Q9ZTR1 Spermidine synthase 11461e-008
Q96557 Spermidine synthase 21461e-008

TrEMBL top hits (Blast detail)Scoree value
Q3ED62 Putative uncharacterized protein At1g23820.22699e-022
A0EVX4 Spermidine synthase1462e-007
A2VC28 Spermidine synthase (Fragment)1462e-007
A5BHF8 Putative uncharacterized protein1462e-007
A7DY57 Spermidine synthase1462e-007

Arabidopsis top hits (Blast detail)Scoree value
AT1G23820.2 SPDS1 (spermidine synthase 1); spermidine synthase2696e-024
AT1G23820.1 SPDS1 (spermidine synthase 1); spermidine synthase2696e-024
AT1G70310.1 SPDS2 (spermidine synthase 2); spermidine synthase1405e-009
AT5G53120.1 SPDS3 (SPERMIDINE SYNTHASE 3); spermidine synthase/ spermine synthase1226e-007
AT5G53120.2 SPDS3 (SPERMIDINE SYNTHASE 3); spermidine synthase/ spermine synthase1226e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information