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Information for unigene UN47127
| FASTA Sequence |
| Unigene ID: UN47127 | Length: 863 |
SSR | | GAAACACAACCATCCATGGCTTCTACTTCCTCCCTCTCTCTCTCTCAAGCCCTCCTCGCTCGCGCCATCTCTCACCATGGCTCCGA
CCAACGCGTCTCCTTAGTACCATCATCTCTCTCCTCACGCGCATCCTCCTCTCGCCGCCGGTGCGTACAAGATCGCTGTCACCAAG
CTCAAGACGCCGTCTATCTTGGCCTTGTCTAGACAGAAGCTTCCTCAGCTTCCAGGGACGTCCATCGAGGGAGTTGAGAAGGGAGG
ATACACAATCTCTGACAACTCCTCGGGGAACAAACCTGATGTGATCTTGATTGGAACCGGTTCAGAGCTGGAGATTGCTGCACAGG
CTGGAGAGGTGCTTAGGAAAGAAGGGAAGACGGTTAGAGTTGTGTCGTTTGTGTGCTGGGAGCTGTTTGACGAGCAGACGGATGAG
TACAAGGAGAGTGTTTTGCCGTCTGATGTGTCGGCTAGAGTGAGTATCGAAGCGGCTTCGACTTTTGGTTGGGGAAAGATTGTTGG
AGGGAAAGGGAAGTCTATTGGTATTAACTCGTTTGGAGCTAGTGCACCAGCTCCCTTGCTCTACAAGGAGTTTGGCACCACCGTTG
AAGCTGTTGTTGATGCGGCTAAGTCATTCTTCTAAGAGACTTAGAGATCAGAACCATTCTCTCTATAAGATTTCATAACATTGTCT
CATTATCTCAAAATAAAATGCAACAAGACGAAAAGACTTTCTTTCTTCTTTTTTTTTTGGTTTCTTGTAATTCGGTTCAACATAGG
TTTTGGGTTTGGGAAGAGAACAGAGTAGAAGACAATGTAAAACTCTCATGATCATTCGTGTATGGTTGTTATATGCTTCAATTTCT
GCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876580 hypothetical protein ARALYDRAFT_486548 [Arabidopsis lyrata subsp. lyrata] | 794 | 2e-082 |
| CAB82679 transketolase-like protein [Arabidopsis thaliana] | 786 | 1e-081 |
| AAO29950 Unknown protein [Arabidopsis thaliana] | 786 | 1e-081 |
| AAM62766 transketolase-like protein [Arabidopsis thaliana] | 786 | 1e-081 |
| NP_567103 Transketolase [Arabidopsis thaliana] | 786 | 1e-081 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42676 Transketolase, chloroplastic (Fragment) | 682 | 7e-071 |
| O20250 Transketolase, chloroplastic | 669 | 2e-069 |
| Q43848 Transketolase, chloroplastic | 651 | 3e-067 |
| Q7SIC9 Transketolase, chloroplastic | 643 | 2e-066 |
| Q42677 Transketolase 7 | 592 | 2e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGH8 AT3G60750 protein (Fragment) | 786 | 1e-081 |
| Q84WI5 Putative uncharacterized protein | 786 | 1e-081 |
| Q8LE99 Transketolase-like protein | 786 | 1e-081 |
| Q8RWV0 Putative transketolase | 786 | 1e-081 |
| Q9LZY8 Transketolase-like protein | 786 | 1e-081 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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