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Information for unigene UN47135

FASTA Sequence
Unigene ID: UN47135Length: 1176 SSR 
GGACTCATCACAGCTCTACATAATCAATCACCTTTAAAGCTCTCATATTTTTCTGTTTATCACATCTCGTTTTAACTGTTCAGGCG
ACAACTATCACTATGGCGGAAGAGTACAAGAACGCTTCGGAGGAGTTCAAGAACGAGACCCCAAAGGTTGCCACCACCGAGGAATC
ATCTGCGACGACGACGACGACGGGAGAGGTTAAGGATCGTGGATTGTTTGACTTCCTCAAGAAAAAAGAGGAAGTGAAGCCTCAAG
AAACGTCGACGACGCTGGAGTCAGAGTTCGAGCACAAGGCTCAGGTCTCGGAACCGCCGGCGTTTGTGGCGAAGCACGAAGAAGAG
GAAGAGAAGGAGCATAAGCCTACTCTCCTCGAGAAGCTCCACCAGAAGCACGAGGAAGAAGAAGAAGAGAACAAACCTAGTCTCCT
CCAAAAGCTTCACCGATCCAACAGCTCTTCTTCCTCTGTAAGTAACTTATTCAATCCGCACGTAACAGTTATTTATTTAAAACTTA
GATTTAGTTTTATAATATGTTTAAGTAATTTATCAGTCAAGCGAGGAAGAAGGTGAAGACGGTGAGAAGAGGAAGAAGGAAAAGAA
GAAGAAGATGGCCGAAGAAGATGAAAAAATAAAGGAAGATAGAAAGGATGTAATGGAGCAGATCAGGGAGAAGTTTCCACACGGAA
CAAAGACAGAGGAGGATGCTCCAGTCATCGCCACCCTGCCGGTGAAGGAGGAAACGGTAGAGCATCCGGAGGAGAAGAAAGGACTG
ATGGAGAAGATCAAGGAGAAGCTTCCAGGTCACAGCGAGAAACCAGAGGATTCTCAAGTGGTCGACACGGGGGCTGCGGTACCAGT
GACTGAGGAAACGGCTGAGCATCCGGAAGAGAAGAAAGGGCTTCTTGAGAAGATCAAAGAGAAGCTTCCAGGTTATCACGCCAAGG
GTACTGAAGAGGAGGAGAAGAAGAAAGAAAAGAAGTCCGATGATTAAGAAGAAAATATGAAAAAAATAATGATGTGGGAGTGGGAC
ATTTGCTGTGTTTCTTTGATGGTTTTCTCTTTTTATCTTTATGATGTTCTTGTAAGATTTGTGTCTTTCGTTGATTTGCATTTGCA
TCTTTATATTATGTAATAATTTCATTATCTCTTTTATAAAGTTTGTGTTGTGTTTTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABD95986 dehydrin [Brassica juncea]6832e-069
AAR23753 dehydrin [Brassica napus]6742e-068
ADJ96373 cold-regulated protein [Brassica napus]4781e-045
AAO48424 cold-regulated protein Cor25 [Brassica rapa subsp. pekinensis]4701e-044
ADK66263 dehydrin [Eutrema salsugineum]4573e-043

Swiss-Prot top hits (Blast detail)Scoree value
P42759 Dehydrin ERD104257e-041
P31168 Dehydrin COR473773e-035
Q9XJ56 Phosphoprotein ECPP442294e-018
P42763 Dehydrin ERD142268e-018
Q54LY8 Uncharacterized protein DDB_G02862991263e-006

TrEMBL top hits (Blast detail)Scoree value
A9X5B4 Dehydrin (Fragment)6831e-069
Q69BP4 Dehydrin6742e-068
Q7XB29 Cold-regulated protein Cor254707e-045
C6EQ93 Dehydrin protein4375e-041
Q3ED89 Putative uncharacterized protein At1g20450.24052e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G20450.1 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding4256e-042
AT1G20450.2 ERD10 (EARLY RESPONSIVE TO DEHYDRATION 10); actin binding4094e-040
AT1G20440.1 COR47 (COLD-REGULATED 47)3782e-036
AT1G76180.1 ERD14 (EARLY RESPONSE TO DEHYDRATION 14); calcium ion binding2267e-019
AT2G21490.1 LEA (DEHYDRIN LEA)1433e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information