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Information for unigene UN47161

FASTA Sequence
Unigene ID: UN47161Length: 966  SNP
GGAAGCACAACCATCTTTCTCCCATCATTACTTGTCACGACCACCCACAAAGGGAAGAAATATATCACAAAGACAGAGAGAAAGAG
GCAGCCCAGTGGTAAAAGATGTCAAAAGATTGCGGTAACCACGGTGGAGGCAAAGAAGCAGCCGTCCGGCGAATCTTAACCGCCGT
AATAGCCTTCATCATAATAGTCCTAATCACCATCTTCCTAGTATGGGCCATACTTAGGCCCACCAAGCCAAGATTCGTCCTCCAGG
ACGCCACAGTCTTCGCCTTCAATCTCTCGCAACCAAACCTACTCACCACAAACTTCCAAGTCACATTCGCATCTCGTAACCCTAAC
TCCAAGATCGGAATCTACTACGACCGTCTCCACGTCTACGCTACGTACCGGAACCAGCAGATAACTCTCCGTACGGCGATTCCTCC
AACGTACCAAGGCCACAAAGAAGACAACATCTGGTCTCCGTTCGTTTACGGAACCGCTGTTCCCATAGCTCCTTACAACTCCGTCG
CGTTGGGGGATGAGCAAGGACGTGGGTTCGTCGGGTTGATGATACGCGCTGATGGGCGCGTGAGGTGGAAAGTAGGGACGTTGATC
ACCGGGAAATACCATATCCATGTTCGGTGTCCGGCCTACATCAATCTTGGAAACAAAGCTGCTGGTGTTATTGTCGGTGACAACGC
CGTTAAGTATACGTTGGTTACTAAATGCAGTGTCAATGTTTAGAACATTGACGGCGTTAAGTTGCTTTTCCCCTTTTTTAATTTAT
TCATAATCAATCATTTTCTTTTTAAGAACAAATTTGCCAAACTTCTTCTTCCACCAGCAAGATAAGGTTTCTGTTTCACTACTTTT
GGTTGTTAAGGTTAGTGTTGATTATTATTATAGAACAATTACAGTCACGATGGTGTGTGGTTGGATTTAACTATATATCCACTTAA
GGTGAAAAAGATGGATTGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876147 hypothetical protein ARALYDRAFT_485614 [Arabidopsis lyrata subsp. lyrata]10585e-113
BAJ34290 unnamed protein product [Thellungiella halophila]10452e-111
NP_001146876 VAMP protein SEC22 [Zea mays]10433e-111
ABB36604 hairpin-induced 1-like protein NHL18B [Brassica napus]10433e-111
NP_190815 late embryogenesis abundant hydroxyproline-rich glycoprotein [Arabidopsis thaliana]9814e-104

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
A9NI57 Hairpin-induced 1-like protein NHL18A10432e-111
A9NI58 Hairpin-induced 1-like protein NHL18B10432e-111
B6SGY4 VAMP protein SEC2210432e-111
Q9SVC8 Putative harpin-induced protein9813e-104
Q9SJ54 At2g359609007e-095

Arabidopsis top hits (Blast detail)Scoree value
AT3G52470.1 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein9821e-106
AT2G35960.1 NHL129013e-097
AT3G11660.1 NHL17931e-084
AT4G09590.1 NHL227518e-080
AT2G35970.1 harpin-induced family protein / HIN1 family protein / harpin-responsive family protein7411e-078

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  25%
 
112  25%
 
191  13%
 
93  38%

Unigene MembersMember information