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Information for unigene UN47163
| FASTA Sequence |
| Unigene ID: UN47163 | Length: 1133 |
SSR | | GGAAGAGGAAGAGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGCAAGCAAAGCAATGGCAGGCATGGGAGCAGGGCCAG
ATCACCTCTTCAATCTGAGAAACCAATTCTATCTGGGAGCTTATCAAACGGCGATCAACAACAGCGAGATCCGTAACCTCTCGCCT
GAGGACGCCGTGGAGCGCGACTGCCTCGTCTTCCGATCTTACATCGCCCTCGGTAGCTATCAGCTCGTCATCAGCGAGATCGATGA
ATCCGCCGCTACTCCACTGCAGGCAGTTAAGCTCCTCGCGATGTATCTATCCAGTCCTGCAAATAAGGAATCAACGATTTCAAGCT
TGAGGGAGTGGTTGGCAGATCCCACAATAGGAAACAATGCGACTTTGCGACTGGTTGCTGGTATTGTTTTCATGCATGAGGAAGAT
TATAGTGAAGCTCTCAAGCACACTCATGCTGGAGGGACTATGGATCTGCATGCGCTGAACGTCCAGGTATTCATTAAGATGCATAG
AACAGATTACGCTGAGAAGCAGCTTGGGGTTATGCAGCAATATGACGAAGACCACACTCTCACTCAACTTGCTACCTCGTGGTTTA
ACCTGGCAGTGGGTGGCTCGAAGATACAGGAAGCTTATCTCATATTCCAGGATTTCTGTGAGAAGTATCCCATGACATGCTTGATC
TTGAATGACAAAGCAGTTTGTTGTATGCAAATGGGTAACTTTGATGAAGCTGAAACACTACTCCTTGAAGCACTCAACAAGGATGC
TAAGGACCCTGAAACTCTTGCAAACCTTGTCGTCTGTAGTCTTCATGTTGGCAAATCATCTTCACGTTACTTAAGCCAGCTGAAAC
TATCACATCCTGAACATGTGCTCGTGAAGCGTGTATCATCAGCCGAAGATAACTTCGAGAGAGCGGTTCAATCTGTGGCCTGAAGA
CTCTTTCATGGTTCAACCTGTGCAGGATCGGTTTGATTTATCACATATATTCCCGTGTTTGGTAAACCCACCAGAATAACTTTTTG
TCTTCTCTTTTTTTTTTAATCAGTATATGAAACAGATTTTGCCATTGGGTTTGTGACATTTACCATTTCATTACTTCTAAATATAA
AGCTTCCAACGTTCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181030 coatomer subunit epsilon-2 [Arabidopsis thaliana] | 1369 | 5e-149 |
| XP_002893638 coatomer protein epsilon subunit family protein [Arabidopsis lyrata subsp. lyrata] | 1323 | 1e-143 |
| NP_174351 coatomer subunit epsilon-1 [Arabidopsis thaliana] | 1317 | 6e-143 |
| AAM65018 coatomer-like protein, epsilon subunit [Arabidopsis thaliana] | 1317 | 6e-143 |
| XP_002317073 predicted protein [Populus trichocarpa] | 1286 | 2e-139 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64748 Coatomer subunit epsilon-2 | 1369 | 2e-150 |
| Q9SA78 Coatomer subunit epsilon-1 | 1317 | 2e-144 |
| Q9MAX6 Coatomer subunit epsilon-1 | 1166 | 8e-127 |
| P0C541 Coatomer subunit epsilon-2 | 984 | 1e-105 |
| A2XY73 Coatomer subunit epsilon-2 | 980 | 3e-105 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9I0V9 Predicted protein | 1286 | 2e-139 |
| B9SV80 Coatomer epsilon subunit, putative | 1213 | 5e-131 |
| B7E599 cDNA clone:001-030-H03, full insert sequence | 1162 | 4e-125 |
| B8AU46 Putative uncharacterized protein | 1162 | 4e-125 |
| Q9MAX8 Epsilon1-COP | 1150 | 9e-124 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G34840.1 coatomer protein epsilon subunit family protein / COPE family protein | 1370 | 2e-151 |
| AT1G30630.1 coatomer protein epsilon subunit family protein / COPE family protein | 1318 | 2e-145 |
| AT2G34840.2 coatomer protein epsilon subunit family protein / COPE family protein | 997 | 3e-108 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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