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Information for unigene UN47198

FASTA Sequence
Unigene ID: UN47198Length: 1017 SSR 
GAAAGATAAAATTCATAATAAATAAAAAACGAAACTTCATTGCGTGACCTACTTGGAACATCTCCCAATTATTATCATCAAAAATA
TCAAAAAACAGAGAGGTTATCCAAAAAAAAAACACAGGGAAGAAGAGTTCAGAGCTTGTGGATGGTTTTCATGTCTACAGCTTCAC
TCAGAGTCCCTTTCTCAACATGATCCCACCACTTCATCAAGAAGTTATCCACCACCAATCTGAACCATGGAGATAGTTTCAGACCT
TCCTCCCCCTGCATCTGCTCTCTTCACCAGCTCCTTCAGCTCTTCCCTGCTCACATACTTGATATCCGCTACTTCGTCCGGATTTG
GTTGGACCTTAACATCCCTCACAATGAACAGCAAGTAGTCCAGTTCGTGCTCTCCCCATTTGCCATCAGAAGGAGCCTTGTAAAGC
ATACGTCCCAGAGGAGTGAACTCATCGACTGGTACATCTTCAGCTACAATACCGAGCTCGTCAAGAAGCTTTCTCTGTGCAGCATT
CCTCACACCGAGAGTATTTTCCTCGATAAGCCCAGATTCACGGTAAAGAGGATGGCTGCAACAAGTGTTTGTCCACACTAGAGGGA
AGGTCACCTTTGCTTTCGACCTTTGCTGGAGAAGCAAGTCATAGTTGGAGTTGAATAAAAATACACTAAAAGCCCTGTGAAGCAGA
TTCTTAGCTTCAATATTTTCCATCAGATGACAATTATATTTGCTGTCATGCCCCACAACACGATCAGTTTCGTCAACAAGAATGCA
TTCGTCTTCGAACATGAGGCGTCTCTGAACAGCATCCATTCCAGCATCTGTCATTGTGGTAGTACCGGAGAAAGCTCGAAAAGTCG
GTAACTTTCTCTGAGAAACGGATCGGAGCGATGACAGAGGGAGATGGGAGAGAGATCTGAGGCGAATCAATGGGAAATTAATAAAT
AAAGAAGAAGCAGACATTTGGTGGTGTGCATGTGGTTCATCTCTCTCTCTCTCACTCACTGTTGCGTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_186927 Isopentenyl-diphosphate Delta-isomerase II [Arabidopsis thaliana]10334e-110
AAF29979 isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase [Arabidopsis thaliana]10201e-108
AAF36996 isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase [Brassica oleracea var. botrytis]10041e-106
XP_002884339 hypothetical protein ARALYDRAFT_477520 [Arabidopsis lyrata subsp. lyrata]9976e-106
NP_197148 Isopentenyl-diphosphate Delta-isomerase I [Arabidopsis thaliana]9367e-099

Swiss-Prot top hits (Blast detail)Scoree value
Q42553 Isopentenyl-diphosphate Delta-isomerase II10332e-111
Q38929 Isopentenyl-diphosphate Delta-isomerase I9159e-098
Q39471 Isopentenyl-diphosphate Delta-isomerase II8673e-092
O48964 Isopentenyl-diphosphate Delta-isomerase I8584e-091
Q39664 Isopentenyl-diphosphate Delta-isomerase II8575e-091

TrEMBL top hits (Blast detail)Scoree value
Q9M6K3 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase10209e-109
Q9M592 Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase10047e-107
Q9M6K2 Isopentenyl pyrophosphate:dimethyllallyl pyrophosphate isomerase (Fragment)9186e-097
Q6EJD1 Isopentenyl pyrophosphate isomerase9105e-096
C6TM75 Putative uncharacterized protein8944e-094

Arabidopsis top hits (Blast detail)Scoree value
AT3G02780.1 IPP2 (ISOPENTENYL PYROPHOSPHATE:DIMETHYLALLYL PYROPHOSPHATE ISOMERASE 2); isopentenyl-diphosphate delta-isomerase10332e-112
AT5G16440.1 IPP1 (ISOPENTENYL DIPHOSPHATE ISOMERASE 1); isopentenyl-diphosphate delta-isomerase9363e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  50%
 
81  25%
 
91  25%

Unigene MembersMember information