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Information for unigene UN47223

FASTA Sequence
Unigene ID: UN47223Length: 1421 SSR 
GGGATCAAACAAAGAAAACACATTTGTCCGAGTTTCGTTCGAGAGCTGCGCCTTCAAGAAATCGCAAGAGAACTTCTTCATTTTTC
TTCGTTCTTTCTACGATTCGATTCCAAAGTATCTCTATCAGGTCAACGTTCTTCTTTGTGGCATTGAGGGGTAGAGGGAGAGATGT
CTGATCATCTGAGTTCATGTACGGACCGTCTCGTAACATCTGATCACTTGAATTCAGACAGAGGAGGATCCATTGAATCTTCTGGA
GAAAGTTCAAGAACTCAAGGCACCACAATCATTTCTTCTACGACTACTACTTTTACTAAATCTAAGGATGATAAAACTGTGCAAGT
AGAAGAACTTGATGTCGAAGACGAAGAGGAACCGCTTATCCAATCAGCTGAATGCCGTATATGCCAAGATGAGGATTCTGTTAAGA
ACCTCGAGTCTCCCTGTTCTTGTAGCGGCAGCTTGAAGTATGCACATCGGAAGTGTGTTCAGCGTTGGTGTAATGAGAAAGGTGAC
ACTATCTGTGAAATATGCCACAAGTCTTATCAGCCTGGCTACACCGCTCCACCACCTCCTCCCGCTGATGAAACTGTTATCGATAT
CGGTGAAGATTGGGCCAATGGTGGTGTTCCCTTAGACTTCAACGACCCGCGCATTTTTGCAATGGCGGCTGCAGAACGCCGTTTCT
TCGATCCGGACTACGACGAGTATGCTGATTCTAACTCTAGCGGTGCTGCTTTCCTTCGCTCCGCTGCTCTTATCTTAATGGCGCTT
TTATTGCTGCGACACGCCATGAACCTTTCAAACAACAACAACTCAGACAACGAAGAAGAAGATGATCCATCAGCTTTCTTCTTTCT
TTTCATGCTCCGTGCTGCCGCTTTTCTCCTCCCTTGTTACATAATGGCTTGGGCCATCAGTATCTTACAACGCCGAAGACAAAGAC
AGGAAGCGGCAGCTCTGGCCGCTGCAGAAGTTGCGTTTATGCTACACAGCGGGGCTGGCGGTGGAGGACAGCGCAGAGGAGGATTG
CATTTCGCTGTAGCACCCGAGCTGATACCGAATCCACAACACCAGCCTGAAGCCTCACCACAATGATTATATATATCCCTGAGTAC
CGGTTAAAGAATCCAAAGTATCATCATTATCCACGACTTTGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTGTTTGTAGTAGCTGTTTGTTGTTTATGGGTTTATTCCTATGAGCAAAAACACAGAAACTGAGTAAAACAAA
ATACGGGAAGTCTCTCTGTCTTATGTTCTTACAGATGAGAAAATAAAGCTTCTTGATATGCTTATGTGTATATACTTATACTTGAG
AAATTACCAACGATCTTAAGAAGATATTCAACATATATATTCGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568953 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]13007e-141
XP_002864796 hypothetical protein ARALYDRAFT_496422 [Arabidopsis lyrata subsp. lyrata]12756e-138
XP_002875846 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]10013e-106
NP_190339 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana]9899e-105
ADA67984 RING-type E3 ubiquitin ligase [Brassica napus]9422e-099

Swiss-Prot top hits (Blast detail)Scoree value
Q0P496 E3 ubiquitin-protein ligase MARCH41391e-007
Q86YJ5 E3 ubiquitin-protein ligase MARCH91391e-007
Q3TZ87 E3 ubiquitin-protein ligase MARCH91391e-007
Q32L65 E3 ubiquitin-protein ligase MARCH21382e-007
Q99M02 E3 ubiquitin-protein ligase MARCH21382e-007

TrEMBL top hits (Blast detail)Scoree value
Q9FJJ6 AT5g62460/K19B1_713005e-141
Q9SN83 Putative uncharacterized protein At3g475509896e-105
D2KC47 RING-type E3 ubiquitin ligase9422e-099
A9CEI2 Uncharacterized protein At3g47550.28651e-090
A5C5T5 Putative uncharacterized protein8435e-088

Arabidopsis top hits (Blast detail)Scoree value
AT5G62460.1 zinc finger (C3HC4-type RING finger) family protein13012e-143
AT3G47550.3 zinc finger (C3HC4-type RING finger) family protein9893e-107
AT3G47550.6 zinc finger (C3HC4-type RING finger) family protein9893e-107
AT3G47550.2 zinc finger (C3HC4-type RING finger) family protein8755e-094
AT2G02960.2 zinc finger (C3HC4-type RING finger) family protein7644e-081

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  80%
 
181  20%

Unigene MembersMember information