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Information for unigene UN47225
| FASTA Sequence |
| Unigene ID: UN47225 | Length: 726 |
SSR | | AAACCCAATCTTCTTCTTCGTCTGCCCGCGTTGAAGAGAAGAAGAAGAAGAACACACCTCTGTGATTCTCTGGGCGATCGGAATAA
AAAAATGTCAATCCTCCAGCTCTCTACCTCTTCCCTCTCTTCTTCTACTATTCTCTCCATCTCTCCGAGAAAATCTCTCTCGTCGT
CTCCCAAGTCGTCTTCCCGAACAATTCGTTGTTCCCTCGAGGGAACCACTGTAACTGAGCGGAAAGTCTCTGCAACCACCGAGCCT
CTTCTTCTGAGAGCTGTTAAAGGTGAAGTTGTTGATAGACCTCCCGTTTGGCTTATGAGACAAGCTGGGAGGTACATGAAGAGTTA
TCAAACTCTCTGTGAGAAGTATCCTTTATTCCGGGACAGATCAGAGAACGCAGATCTCGTGGTGGAGATTTCTCTTCAACCCTGGA
AAGTGTTCAAGCCGGATGGTGTGATTCTGTTCTCAGACATTCTCACTCCTTTGTCCGGAATGAACATACCTTTCGACATTGTCAAA
GGAAAAGGTCCCATCATCTTCAACCCGCCGCAGTCAGCTGCTGACGTGAACCAAGTCAGAGAGTTTGTGCCAGAGGAATCTGTTCC
TTATGTTGGAGAAGCACTCAAGAGACTAAGAAACGAGGTGGGCAACGAAGCTGCTGTTCTTGGCTTTGTTGGAGCTCCGTTTACTC
TCTCCTCATATGTTATTGAGGTGGCTCATCAAAGAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_181581 Uroporphyrinogen decarboxylase 2 [Arabidopsis thaliana] | 946 | 3e-100 |
| AAK59562 putative uroporphyrinogen decarboxylase [Arabidopsis thaliana] | 946 | 3e-100 |
| XP_002879873 hypothetical protein ARALYDRAFT_903342 [Arabidopsis lyrata subsp. lyrata] | 936 | 4e-099 |
| XP_002520842 uroporphyrinogen decarboxylase, putative [Ricinus communis] | 736 | 6e-076 |
| XP_002274385 PREDICTED: similar to Uroporphyrinogen decarboxylase, chloroplastic [Vitis vinifera] | 730 | 3e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22886 Uroporphyrinogen decarboxylase 2, chloroplastic | 946 | 1e-101 |
| Q42967 Uroporphyrinogen decarboxylase, chloroplastic | 712 | 2e-074 |
| Q10LR9 Uroporphyrinogen decarboxylase 2, chloroplastic | 669 | 2e-069 |
| Q42855 Uroporphyrinogen decarboxylase (Fragment) | 625 | 2e-064 |
| O81220 Uroporphyrinogen decarboxylase, chloroplastic | 617 | 2e-063 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q94C92 Uroporphyrinogen decarboxylase | 946 | 2e-100 |
| B9S4C3 Uroporphyrinogen decarboxylase | 736 | 4e-076 |
| B7FIJ3 Uroporphyrinogen decarboxylase | 728 | 4e-075 |
| C6TEE8 Uroporphyrinogen decarboxylase | 720 | 3e-074 |
| C5X0S2 Uroporphyrinogen decarboxylase | 678 | 2e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT2G40490.1 HEME2; uroporphyrinogen decarboxylase | 955 | 1e-103 |
| AT3G14930.1 HEME1; uroporphyrinogen decarboxylase | 490 | 9e-050 |
| AT3G14930.2 HEME1; uroporphyrinogen decarboxylase | 490 | 9e-050 |
| AT3G14930.3 HEME1; uroporphyrinogen decarboxylase | 412 | 1e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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