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Information for unigene UN47251
| FASTA Sequence |
| Unigene ID: UN47251 | Length: 906 |
SSR | | GGAAATAAAATCGGAGGTTCGGTTAAGAAAAGATCGGTGCTTGAATCATCATCATCGGGTGGTTCTGAAATTTCGCTTTCCTCTCG
TCGTCGTCGTCGTCTTCGTCATCAGATCTCTCATTACGTTCCGTCTGTGAGAAAGTAAAAGCTTGAGGATGGCCTCTGAGACTGGA
GAAGTCACCATCGTATGCAACCACTGTGACAGAGACATTCCAGCTCCAAATATTGATCTGCATCGTGTACATTGCGCCCGGAATCT
AGAAAAATGTAAGATTTGTGGTGATATGGTTCCTAAAAAGCATGCCCAGGAACACTTCTCCAACACCCATGCTCCGGTACCATGCT
CGATGTGCAAAGAAACCATAGACCGTGAGGTTTTTAATAGTCATACAGAAGAAATCTGCCCCAAGAGGATGGTAACTTGTGAGTTC
TGTGAGTTTCCACTGCCTGCAGTTGATCTTCCTGAGCATCAGGAAGTATGTGGCAACCGCACCGAACTCTGTTATCAATGCAACAG
CTATGTTAGATTGCGTGAAACGTTTAACCATGAAACCAAGTGCCCTGGTTCTGTGCTCAACACTGTTGAATCTTCCAGAAGGGTTC
CAAGACCAGCAGAAGGAGATGGAAACGGCAGGAGGAGAAGAGGTGGCAACGGTGTATCTAACAAAAGGCTTTTCTTCACGATAGCT
ATAACGGGAATAGCTGTGTTATTAGGATCGCTCTTCTTCCAGAGGAAGCCTGAGGGTGGGAGCTAAGCAGAGAGAGACATATATAG
CTCGTGCGTAGTTCTGTAAAGTTTGCTCAAACTCCCTTCCAGACAGATTCGAAGGAAGGGGTTTTATACATTTTAAAATACTTACT
GAGACAGAGATGTTCTTTCTTCGCTAAGGATTTGTTTAAGCTGATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_563857 TRAF-type zinc finger-related protein [Arabidopsis thaliana] | 911 | 5e-096 |
| AAM65755 unknown [Arabidopsis thaliana] | 887 | 3e-093 |
| XP_002301111 predicted protein [Populus trichocarpa] | 697 | 3e-071 |
| ACU14966 unknown [Glycine max] | 688 | 3e-070 |
| XP_002527351 nucleic acid binding protein, putative [Ricinus communis] | 682 | 2e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99MM4 TRAF-type zinc finger domain-containing protein 1 | 269 | 6e-023 |
| Q4R970 TRAF-type zinc finger domain-containing protein 1 | 265 | 2e-022 |
| Q3UDK1 TRAF-type zinc finger domain-containing protein 1 | 263 | 3e-022 |
| O14545 TRAF-type zinc finger domain-containing protein 1 | 260 | 7e-022 |
| Q58D05 TRAF-type zinc finger domain-containing protein 1 | 255 | 3e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7A5 Expressed protein | 933 | 9e-099 |
| Q8L9U7 Putative uncharacterized protein | 887 | 2e-093 |
| B9GN75 Predicted protein | 697 | 2e-071 |
| C6T0E3 Putative uncharacterized protein | 688 | 2e-070 |
| B9SMY2 Nucleic acid binding protein, putative | 682 | 1e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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