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Information for unigene UN47274
| FASTA Sequence |
| Unigene ID: UN47274 | Length: 938 |
SSR | | GGATCTTGCTTCGATCAGAGCCGCGTCTTCTTCTCTTTGAATCAAGCTTTCTTCGATTTCGCATCTCTCAGGGGTAGGAGCTAGAG
AGCGTGAGAGATCTATCGCGCAAAGACCCTACCTTTTTTTTAGAGCAGGTCACTCCCAATGTCGGGCCTTGTGGCGCTATGCAGAG
CTCGAACTTCTTCTTCTTCTTTATTGAACAGCCTTGTTCGTCCAGTATTTCGCACTCTCTCTACAGGTTTTGGTGATGTGCAGAAC
AAAACACTTGTGGCAGAAATGGAAGAAAAGATGCTCCACATGGACATCAACTCAATGATTGGAAGTTCCATGCCACTAGGTATGAT
GCGCATAGGAACAATCATCCACAACATCGAGATGAACCCTGGCCAAGGCGCCAAGCTAGTCCGCGCTGCAGGAACAAACGCCAAGA
TCCTAAAGGAGCCTGCTTCAGGGAGATGCTTGATAAAGCTTCCATCAGGGGACACCAGGTGGATCAACGCCAGATGCCGTGCTACT
ATCGGTACAGTGTCGAACCCGTCTCATGGAGTGAAGAAGCTGTATAAAGCAGGGCAGAGTAGGTGGCTGGGGATAAGGCCTAAAGT
GAGAGGTGTGGCGATGAATCCTTGTGATCATCCACACGGTGGTGGTGAAGGGAAGAGCAAAAGTAGTGGAAGCAGAGGAAGGACAT
CGGTTAGCCCTTGGGGGAAACCGTGCAAAGGAGGTTACAAGTCAGCTAGTGTCAAGAAGAAGAAGAAGAGATTGGCAGCTAGAGAA
GCCAAGATGTGACTCATTTGATGAAAGGAAAGTTTAACGAATGAATCACATTGTTGAATCTAGCTGACTTGAGTTTTAATTTAATG
ACATTGTTGAATCTCTGTGAGTTTTAAATTTAATAAATTCAGAACAATCGTTGATCCGCTATGGATGAAGATGGTACG
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 1007 | 4e-107 |
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 1002 | 1e-106 |
| AAM64400 unknown [Arabidopsis thaliana] | 999 | 3e-106 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 850 | 6e-089 |
| AAK95391 ribosomal protein L2 [Gossypium arboreum] | 641 | 1e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 504 | 4e-050 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 504 | 4e-050 |
| P92812 60S ribosomal protein L2, mitochondrial | 504 | 4e-050 |
| P26859 60S ribosomal protein L2, mitochondrial | 464 | 2e-045 |
| O21247 60S ribosomal protein L2, mitochondrial | 394 | 2e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZU4 Expressed protein | 1007 | 3e-107 |
| Q8LCY4 Putative uncharacterized protein | 999 | 2e-106 |
| Q39213 Ribosomal protein L2 | 850 | 4e-089 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 641 | 7e-065 |
| B9IJ49 Predicted protein | 619 | 3e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 1008 | 1e-109 |
| AT2G44065.2 ribosomal protein L2 family protein | 1008 | 1e-109 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 318 | 1e-029 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 318 | 1e-029 |
| AT3G51190.1 structural constituent of ribosome | 217 | 6e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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