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Information for unigene UN47288

FASTA Sequence
Unigene ID: UN47288Length: 1346 SSR 
GGGGCAACCAACCGGCGAGAGCAAAAGAAAGTACTTACGAGAGATAGAGAGAGAGAGATGTCGAAGACGCTGGTGCAGCCGGTAGG
GCAGAAGAGGTTGACGAACGTCGCAGTGGTTCGATTGAAGAAGCAAGGCAACCGCTTCGAGATCGCTTGCTACAAGAACAAGGTCC
TTTCTTGGCGTTCCGGCGTGGAGAAGGACATAGATGAAGTGTTGCAGTCGCATACTGTTTACACAAACGTCTCCAAGGGAGTTCTT
GCTAAATCTAAAGACTTGATAAAGGTCTTTGGATCCGATGATCACACCAAGATCTGCTTGGAGATTCTGGAGAAGGGTGAGCTTCA
AGTTGCTGGCAAAGAGAGAGAGTCGCAGCTGTCGGGCCAGTTTAGGGATATCGCTACGATTGTGATGCAGAAAACCATTAACCCTG
AGACCCAACGCCCTTATACCATTAGCATGGTTGAGCGTCTTATGCATGAGATCCATTTCGCTGTTGATCCTAATAGCAACTCCAAG
AAGCAGGCTCTTGATGTCATCCGTGAGCTGCAGAAGCACTTCCCTATAAAGCGTTCTCCGATGAGACTGCGTCTCACTGTTCCTGC
TCAGAACTTCTCCTCGCTTCTGGAGAAGCTTAAAGAATGGGACGCTTCTCTTGTCTCCAAAGACGAATCTGGAACTCACATGTCCA
CTGTATGCGAGATGGAACCGGGGCTATACCGAGAGTGTGATTCCCTTGTGAGGAATATGCAGGGGAGACTAGAGATACTCGCTGTA
TCGGTTCATGCTGAAGGCGACACGAGCATGGATCATTACGATGAGCATGACGATATGGCATTGCAGACAAACAAGCCATTGTTACC
TCTTGAGACCGAGACCGACGAACTTAGCAAGAAAATGCAGAAGCAAGAGATTGGTACTACTAGTGACAACACAAAGGAAGAAGAAG
GAGGAGAAGGGAAAGGGATCAAGTGCAGTACGTGCAACACGTTTGTTGGAGAAGCTAAGCAATACAGAGAGCATTTCAAGACTGAT
TGGCACAAACACAACCTGAAGCGGAAGACTCGTAAACTCCCTCCTCTTACTGCTGAAGAATGCTCCGCTGAGGTTGACATGGATGA
CTCCAGATCAGACTTGAAAGACTACTCTTTCTGATATATTTTACAGCTTTTGGCATTTAGTGGGTGAGTATGAACACGCAAACTTG
TTGTGGAGCTGATCAGGAATGAATCTTTTTTTTTGTTTATTATTGTTGCAGTTAACAGACCTTTTTCTCGAGTCTATAAATGTCTT
AATACCTTTCAGCTTGGAGTATAATTTAGGGAAGTTTCAAGGGATAAATGAAGGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM63300 unknown [Arabidopsis thaliana]16815e-185
NP_564488 sequence-specific DNA binding transcription factor [Arabidopsis thaliana]16806e-185
XP_002891277 transcription factor [Arabidopsis lyrata subsp. lyrata]16653e-183
XP_002266110 PREDICTED: hypothetical protein [Vitis vinifera]13177e-143
ACU20203 unknown [Glycine max]11691e-125

Swiss-Prot top hits (Blast detail)Scoree value
Q3SWZ6 Ribosome maturation protein SBDS6677e-069
Q5ZIY4 Ribosome maturation protein SBDS6651e-068
P70122 Ribosome maturation protein SBDS6614e-068
Q5RK30 Ribosome maturation protein SBDS6614e-068
Q9Y3A5 Ribosome maturation protein SBDS6561e-067

TrEMBL top hits (Blast detail)Scoree value
Q8LDC0 Putative uncharacterized protein16813e-185
Q9MAR2 At1g4386016804e-185
C6TEF1 Putative uncharacterized protein11697e-126
B9GTN9 Predicted protein11446e-123
B8BA40 Putative uncharacterized protein11222e-120

Arabidopsis top hits (Blast detail)Scoree value
AT1G43860.1 transcription factor16812e-187

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
112  67%

Unigene MembersMember information