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Information for unigene UN47295

FASTA Sequence
Unigene ID: UN47295Length: 1341 SSR 
GGACGCTGCCTTCCAATTAAAAACAAGCCATTATGAAACATTGTTAAGAGAAGCGAAAAAGAACAGAGAAAGCTGGAAAATTAAAA
AAAAATCCCTTCTTTCCTGCAGAAGAGAAGAGAGAATCTATCGATAGGTTTTGCTGTGTTTTGTTAATTAGTGAAGATGATGGTAG
CAGCTATTAACAGCTTCGATCTTTGGCAAAAGGATGTGTTTTTCTCAGCAGCAGAGGAGGTTCAAGAATCTGCCGATACAATGGAA
TCTGCGTATAGGGTTTGGACTAAAGAGAAGAGACAAGGTCGATCAGACCAGCTCTGCATTGAACTTCAAGCTGCTTTGAGCACTGC
TAAATGGCAGCTGGAAGAGTTTGAGAGGGCAGTGAGGTTGAGCCACCATGGACATTGCCGAGACGACACTACCTTGACTCGGCATA
AACAGTTTGTCAACGCTATCGAGAACCAGATTCACCGAGTGCAGTCCGCACTGCAAGAGGCTTTGGCCGAGAACGGGAAACAGCCT
CTGCGTTTGGTTGATCTCAACAAAGAAGAGCGTGATGACCTTGCCATGTTTCTCTCTGGATCTTCTCTTACCTCAGAGAGTAGCAT
CAACTTGAGAGACTCCTCAACAAGTTCCTTGGCTGAAAATTCGCGTGGGATCAACAGCTGTGTGATAGACATTGTTGACGAGGGAG
GTAGCCCTGAAAGTGCTGATGCTGTAATCCGCGTGCAGCAGGGTGCGGATAAAAGGTCGGGGACGAGAAGAACATGGAGTTCACCG
AATTTTCCTAACGTAACTGCGTTGAGGATTAATGTGGAAGAAGAAGAGGAGAAGAAGAAGAAGAAGAGACTTGTGTTAGACATTGA
AGACACTCCTAAGGAGAAAGGATCTAAACCTCTGTTTTCAATGCAGAGATGTCGTTATTATAACCTTATCTTTGACAGAGTCAGCC
AATGTCGAAGGAGGTTTCGTGCTCCCTTTAGCAGACCGGTCCAGCTCATTCTTTCCTTCACGCTAATCTTGTTTCTTCTATTGCTG
TTTGGAGTTTATTAGTCTTGACAACTTAAAACTTTGGTTTCCTGAAACCCTCGAGAACATTTGACAAGGTTACATATTCTTGCTTG
TTGGTTGGTCACACACATTCGAAGAACAAGCCTGCATTTTCTTTACTTTCTTTTGTCCTCAAGGAAACATATATAGGAACTTGTAA
CTTTGTAGGTCTATTGTAAAGTATACTAAAAAGAATTTGCTGTGTTGTTGTTACAAATCTATGCGGTTAAGGTTGTTGAAGTTCAC
CACGGTCCTTGAAAATTGGATTTTTGAGTATGGAGTTTTCATAGCAAGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAB52468 putative protein [Arabidopsis thaliana]9763e-103
NP_567842 Syntaxin/t-SNARE family protein [Arabidopsis thaliana]9753e-103
NP_179476 Syntaxin/t-SNARE family protein [Arabidopsis thaliana]7343e-075
XP_002867360 hypothetical protein ARALYDRAFT_491727 [Arabidopsis lyrata subsp. lyrata]6627e-067
AAD08955 unknown protein [Arabidopsis thaliana]6554e-066

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SUM0 Putative uncharacterized protein AT4g302409762e-103
Q944G8 AT4g30240/F9N11_909752e-103
Q501A1 At2g188607387e-076
O64616 Putative uncharacterized protein At2g188606581e-066
A8MQE6 Uncharacterized protein At2g18860.26241e-062

Arabidopsis top hits (Blast detail)Scoree value
AT4G30240.1 protein binding9973e-108
AT2G18860.1 syntaxin family protein7393e-078
AT2G18860.2 syntaxin family protein6255e-065
AT1G27700.1 protein binding3226e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  40%
 
82  40%
 
61  20%

Unigene MembersMember information