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Information for unigene UN47308
| FASTA Sequence |
| Unigene ID: UN47308 | Length: 1031 |
SSR | | GGCCGCACTTGAAGGTTGAGAGAGAGAGACAGAGAGAGAGGAAGAGAATCAATCAAGTGATGGGAGATGTCAAAGTAGACGAAGAT
GCGATTCTAAAATCCTTCCTCGCGGAGGTCGGTGAGGTTGAGAGGGACAACGAAGTCGTCAGGATTCTCTCATGTTTCAAGCTGAA
CCCGTTTGAGCATCTTAACTTATCTTTCGATTCTTCCACGGATGAAGTTAAAAGACAGTACAGAAAGATATCTTTGATGGTTCATC
CTGACAAATGCAAGCATCCTCAAGCACAGGAGGCTTTTGGAGCATTGGCAAAGGCGCAACAGCTGCTACTGGACGACCAAGAAAGA
GATTATATTCTCACTCAAGTCCAAGCTGCCAAACAAGAGCTTAAGATGAAGAGAAAGAAACAGTTGAAGAAAGATACCGCCTCTAA
AATAAAGTCCTTGGTTGATGAGGGTAAGCATGAGCAACTATATGAACAATCTGAAGAGTTTCAGAAGGAGCTTAAGTTAAAGGTCC
GAGAGATATTAACAGACCAAGAGTGGCGTAGGCGAAAAATGGCTATGAGGATATCAGAAGAAGAGGGAAGACTGAAGAAGGATGAA
GAAGAACAAAAGGAGATACGGAAGAAAAAGCGTGAGCATGAAGAACAGTGGGAAGGAACGAGAGAAAACAGGGTGTCAAGCTGGAG
AGACTTCATGAAAGCAGGAAAGAAGGCCAAAAAGGGAGAGACACGTCCTCCAAAATTGAAGACTGAGGATCCAAACAAATCATACG
TTCAAAGGCCGGTCAAGAAAGGCTGATTCCTGTCTCCTTTTTGCTGTTGTTGCCATTGGTAGATTGGTCTTCTCGAGTATGATCTC
ACACTTGTTCTGCTCATGTCTGTGTTTCTCTTTGTACATCACCAACTTCTTTGTGTTTCCAAATACATCAAAAACATGGACGAGAG
ATAAATTTTATCTCACTTCTCAAACGCTTATGACCTCTTAACTTCTGTATTGTGTTAGACTTCGTATAATACACTTTTAGTCTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002874045 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 1200 | 2e-129 |
| NP_680194 DnaJ homolog subfamily C member 8 [Arabidopsis thaliana] | 1199 | 2e-129 |
| XP_002299768 predicted protein [Populus trichocarpa] | 1068 | 4e-114 |
| XP_002513734 J domain-containing protein spf31, putative [Ricinus communis] | 1064 | 1e-113 |
| XP_002314254 predicted protein [Populus trichocarpa] | 1057 | 7e-113 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O74746 J domain-containing protein spf31 | 176 | 4e-012 |
| Q95J56 DnaJ homolog subfamily C member 14 | 138 | 1e-007 |
| Q921R4 DnaJ homolog subfamily C member 14 | 137 | 1e-007 |
| Q6Y2X3 DnaJ homolog subfamily C member 14 | 136 | 2e-007 |
| Q5XIX0 DnaJ homolog subfamily C member 14 | 136 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C580 Putative uncharacterized protein At5g22080 | 1199 | 2e-129 |
| B9GHL8 Predicted protein | 1068 | 3e-114 |
| B9RJ15 J domain-containing protein spf31, putative | 1064 | 7e-114 |
| B9HQ72 Predicted protein | 1057 | 5e-113 |
| C6TN12 Putative uncharacterized protein | 1048 | 5e-112 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G22080.1 DNAJ heat shock N-terminal domain-containing protein | 1200 | 7e-132 |
| AT1G65280.1 heat shock protein binding | 185 | 4e-014 |
| AT3G57340.1 DNAJ heat shock N-terminal domain-containing protein | 132 | 5e-008 |
| AT3G57340.2 DNAJ heat shock N-terminal domain-containing protein | 132 | 5e-008 |
| AT5G05750.1 DNAJ heat shock N-terminal domain-containing protein | 126 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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