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Information for unigene UN47321

FASTA Sequence
Unigene ID: UN47321Length: 1102 SSR 
GGATCCTATTATTTCTCTCTCCCTTGTCTCCGATTCCGATCTGTTCTTTTTCTCCCCGATCCGCTCTTCAGACACAAAAAGGGTTT
CTAATTCGGATCTGTACTTTCGCCCATGGATACTCGTAAGAGAGGACGGCCTGAAGCTGCTGATTCGTTCAACTCCAATGGCGGCG
GCGGAGGATTCAAGAAGTCTAAGCAAGAGATGGAATCATATTCAACTGGTTTAGGAAGCAAATCCAAGCCTTGCACTAAATTTTTC
ATCACTTCTGGCTGTCCTTTTGGAGATAACTGCCACTTTTTGCATTATGTTCCCGGAGGATACAATGCTGTAGCACAGCTGACGAA
CATGGCGCCCATGCCTCAAGCTTCCAGAAACATGCAAGGATCTGGTGGTGGTGGTGGAGGAGGGAGATTCTCAGGGAGAGGAGGAG
GAGAGTCTGGTCCTGGACACGTGTCTAGCTTTGGTGCATCAGCCACTGCGAAGATCAGCGTGGATGCTTCGCTGGCCGGCGCCATC
ATTGGTAAAGGAGGAGTCAGTTCGAAACAGATATGTCGTCAGACAGGGGCGAAGCTGTCGATTCAAGACCACGAGAGAGACCCTAA
CCTGAAGAACATTGAGCTCGAAGGAACGTTCGAGCAGATAAACGAAGCTAGCGCGATGGTTAGGGAGCTGATTGGGAGGCTTAACT
CTGCAGCTAGTAGGAGACCACCTGGTGGTGGTGGTGGTGGTCTTGGTGGAGGTGGGGTTGGTTTTGAAGGGAAACCGCATCCAGGG
AGCAACTTCAAGACGAAGATGTGTGAGAGATTCGCGAAAGGGAACTGTACGTTTGGTGATAGGTGTCACTTTGCACACGGGGAAGC
AGAGCTGCGCAGGTCAGGAATTGCCTAGTTTGCTGGGCATAAGACCAGTCTTTTCTTTTGTGATCTCTAATATCATCTTCATCTAC
TTTGTTTTTGTGTTTGTTTTAATGAAAATACAATGTTAGTTTCATTGTCATTGTAAGTTTTCTTTCTCTCTCTCTATGTGGTGATT
CTTAGAATATGGTCTTTTTGTTAAATGGAGTTTGAATTGATGAGATGAGAGGTTTGGTGGATGAGTGACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884884 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]11043e-118
BAJ34617 unnamed protein product [Thellungiella halophila]10944e-117
NP_566412 zinc finger CCCH domain-containing protein 36 [Arabidopsis thaliana]10774e-115
BAB01961 unnamed protein product [Arabidopsis thaliana]9896e-105
XP_002873278 KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]9223e-097

Swiss-Prot top hits (Blast detail)Scoree value
Q9C7C3 Zinc finger CCCH domain-containing protein 3610772e-116
Q9FG30 Zinc finger CCCH domain-containing protein 529132e-097
Q7XPK1 Zinc finger CCCH domain-containing protein 314597e-045
Q7F8R0 Zinc finger CCCH domain-containing protein 143191e-028
Q69XQ3 Zinc finger CCCH domain-containing protein 443073e-027

TrEMBL top hits (Blast detail)Scoree value
B4F7X6 Putative uncharacterized protein5154e-050
C5Y9Z9 Putative uncharacterized protein Sb06g0320005154e-050
B7F7Y2 Putative uncharacterized protein4591e-043
B8AVZ7 Putative uncharacterized protein4591e-043
Q01MN3 H1005F08.11 protein4591e-043

Arabidopsis top hits (Blast detail)Scoree value
AT3G12130.1 KH domain-containing protein / zinc finger (CCCH type) family protein10833e-118
AT5G06770.1 KH domain-containing protein / zinc finger (CCCH type) family protein9193e-099
AT1G32360.1 zinc finger (CCCH-type) family protein1309e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

Unigene MembersMember information