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Information for unigene UN47355
FASTA Sequence |
Unigene ID: UN47355 | Length: 993 |
SSR | | AAGTCTGTATAAGTGTGTTATTTAATACACCTAAGGACCAAATAAGACATTCTTAATCTATGTTGAGAATTACATATGAAGTTTGT
GTAAGTGTGTTCAAGGCTTTCGCATATTATTACTTGGGAAATATAGATAACTTTAGTAGTTGGACAAACAAACTCGATCTCAAAAG
CTTTTAAGAGGAAGAAGAGGAACTTAGCATCCTTTGTTTGATCCATGACTCCAGATACTGAAGCTCATTATTACTGATTGAGTGTC
CAAGATCTGGATATGCCTTAAATTCACAAGTGACACCAGCTTGTTGAAGGAAAGGAAGAGCTGCTTGACCAGCTTCGAATAGTACC
GTCTTGTCATCAATCCCATGAGACCACAAGATTGGTGTCTTTATAGCATCTTTGGTAAACTGATTGATGACAGAAGAATTGAATGG
AACCCATCCGCTAAAGACTGCACCTCCTCCAAGAGTTTTGGGGTGAAGCAGAACACTAGCCAAGGTTAATGCCCCTCCTTGGCTAA
ATCCGCAGATATACACGTTTTGAGGACTCACTCCTCCAGCAATCTCCTTATCTATAATGGCATGAACGTTCTTAACAGCTTCAAGC
ACGCTGCTTTCGTCATTAGGAGAGCCCGCGGTAAGAGGAAGCTCACGGATGTCAAACCAGGAAGGCATCACCATACCATGATTGCA
GGAGACAGGATTAGGAGGAGCAGAAGGGAAGAGCCATTTGGTGTTTGTAAACTCCGGAGACTTGAAAAGTGACTTGATGGGTTCGT
TGGCAGGTCCGGAATCTCCAAGCCCGTGAAGCCACAAGATGAAGGTTCTTCGAGCCATGGAGTCTGAAGAAGAGGGATATGATGAT
GATGATGAGTAAGGCTTGTCTTCGAAGAAGAATGCGAAGAAGAGGACGGTGCTCAACAGTGCGATCGAGAAGAGAACGATCGGTTT
CGTCAATGTGCTTGTTCGCATGTCAATATCGATCCTGCCGTCACCCC
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GenBank top hits (Blast detail) | Score | e value |
NP_193961 carboxylesterase [Arabidopsis thaliana] | 1146 | 3e-123 |
XP_002867777 carboxylic ester hydrolase [Arabidopsis lyrata subsp. lyrata] | 1129 | 3e-121 |
ABO26814 SOBER1-like protein [Arabidopsis thaliana] | 1030 | 9e-110 |
CAA16780 putative protein [Arabidopsis thaliana] | 1009 | 2e-107 |
XP_002317196 predicted protein [Populus trichocarpa] | 916 | 1e-096 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q5KFA4 Acyl-protein thioesterase 1 | 366 | 4e-034 |
Q6CGL4 Acyl-protein thioesterase 1 | 305 | 5e-027 |
Q6FW75 Acyl-protein thioesterase 1 | 296 | 5e-026 |
Q6CJK6 Acyl-protein thioesterase 1 | 290 | 3e-025 |
Q4I8Q4 Acyl-protein thioesterase 1 | 289 | 3e-025 |
TrEMBL top hits (Blast detail) | Score | e value |
Q8GYK2 Putative uncharacterized protein At4g22300/T10I14_130 | 1146 | 2e-123 |
A4KWB1 SOBER1-like protein | 1030 | 6e-110 |
O49635 Putative uncharacterized protein AT4g22300 | 1009 | 2e-107 |
B9HZJ0 Predicted protein | 916 | 1e-096 |
B9RXD5 Acyl-protein thioesterase 1,2, putative | 905 | 2e-095 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT4G22300.1 SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase | 1152 | 3e-126 |
AT1G18773.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1); carboxylesterase (TAIR:AT4G22300.1); Has 30 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | 171 | 1e-012 |
AT3G15650.1 phospholipase/carboxylesterase family protein | 130 | 8e-008 |
AT1G52700.1 phospholipase/carboxylesterase family protein | 126 | 2e-007 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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