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Information for unigene UN47391
| FASTA Sequence |
| Unigene ID: UN47391 | Length: 873 |
SSR | | CGTTTATTAAAAACGTTTATGGCACGATCAAAACGTTTGATTTCAGTTTCAAGAAAAAAAAAGAAAACACGTAACAACATTCATAA
CCAACTCTCTCTCAAAAAAAAAGATGCATTTGAAGACATTAATGTAACTTGTTCTATCAAGATCACATCTTGGCTTCTCTAGCAGC
CAATCTCTTCTTCTTCTTGACACTAGCAAACTTGTAACCACCTTTGCACGGCTTCCCCCAAGGGCTAACCGACGTCCTACCTCTGC
TTCCACTACTTTTGCTCTTCCCTTCACCACCACCATGTGGATGATCACACGGATTCATCGCCACTCCTCTCACTTTGGGTCTTATC
CCCAGCCACCTACTCTGTCCTGCTTTATACAGCTTCTTCACTCCATGGGACGGGTTCGAGACAGTGCCAATGGTAGCACGGCACCT
AGCGTTTATCCACCTGGTGTCGCCTGAAGGAAGCTTGATCAAGCACTTCCCAGAAGCAGGCTCCTTGAGGATCTTGGCGTTTGTTC
CCGCAGCACGTACTAGCTTGGCGCCTTGACCTGGGTTCATCTCGATGTTATGGATGATTGTTCCTATGCGCATCATTCCTGGCGGC
ATGGAACTTCCTATCATTGAGTTGATGTCCATGTGAAGCATCTTTTTCTTCCATTTCCGCCACCAGTGTTTTGTTCTGCACATCAC
CAAAACCTGTGGAGAAGCTGCGAAATGCTGGACGAACAAGGCTATTGAACACAGAAGAAGAAGAAGAAGAAGCTCGAGCTCTGCAT
AACGCCACAAGGGCCGACACGATTTTTTTTTGCACTCTCTCTATCTCCAACCTGAGAGAGAGAGAAGCTGAAACGACGAAGCTAGA
ACAAACGCGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 818 | 3e-085 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 818 | 3e-085 |
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 817 | 4e-085 |
| AAM64400 unknown [Arabidopsis thaliana] | 810 | 2e-084 |
| XP_002323926 predicted protein [Populus trichocarpa] | 610 | 4e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 496 | 3e-049 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 496 | 3e-049 |
| P92812 60S ribosomal protein L2, mitochondrial | 496 | 3e-049 |
| P26859 60S ribosomal protein L2, mitochondrial | 451 | 4e-044 |
| O21247 60S ribosomal protein L2, mitochondrial | 384 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q39213 Ribosomal protein L2 | 818 | 2e-085 |
| Q8VZU4 Expressed protein | 818 | 2e-085 |
| Q8LCY4 Putative uncharacterized protein | 810 | 2e-084 |
| B9IJ49 Predicted protein | 610 | 2e-061 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 601 | 3e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 819 | 9e-088 |
| AT2G44065.2 ribosomal protein L2 family protein | 819 | 9e-088 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 309 | 1e-028 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 309 | 1e-028 |
| AT3G51190.1 structural constituent of ribosome | 210 | 4e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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