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Information for unigene UN47404

FASTA Sequence
Unigene ID: UN47404Length: 1120 SSR 
GGATCGTTCCCCCCATTGCTAGAGAGATTAGATTCGAGAGAGAGAGAAGAAGAAGAAGATGAGTTTCCAAGATCTCGAAGCTGGCT
CTCGATTTCAATCGCCGAATCGTTTCACCGGCGGGAGGAGGCAGCAGAAACCTCTGTCGCGTGGAGATCCGTCTCAGGAGGTAGCC
GCCGGGATTTTCAGGATCAGCACGGCCGTCAATTCCTTCTTCCGCCTCGTTAATTCGATCGGAACGCCTAAGGATACTCTCGATTT
GCGAGATAAGCTGCAAAAGACAAGGTTGCAGATATCAGAACTGGTGAAAAATACGTCAGCTAAGCTTAAAGAAGCTAGCGAAGCCG
ACCTCCATGGAGCAGCTACTCCAATTAAGAAGATTGCGGATGCTAAACTGGCGAAAGATTTCCAATCAGTTCTCAAAGAGTTTCAG
AAAGCTCAGAGACTTGCAGCTGAAAGATAATTAACATATACTCCTGTCGTCACTAAAGATATGCCTACCAGTTATAATGCACAGGA
ACTGGATATTGAATCTTTGAGGACGTCCCAGGAGCAAACTCTTTTTCTACAATCAAAAAGGCAAGAAGTGGTGTTTCTAGATAACG
AGATAACATTCAATGAAGCAATTATTGAGGAAAGAGAGCAAGGAATAAGAGAAATTCAAGAGCAGATTGGTGAAGTGAATGAAATC
TTCAAAGATCTAGCTGTCTTAGTGAACGATCAAGGAGTTATGATCGATGACATCAGCTCTAACATTGATAATTCACATGCTGCAAC
TGCACAAGCAACTTCCCAACTCCGAAAAGCATCTAAAACTCAAAGAGCAAACTCATCCTTGACATGCCTTCTTATTCTCATATTTG
GGATTGTTATACTCATTGTCATCATCGTTGTCCTGGTCTGAGCACCAAGCTCCAAGCATCAACCGAAGAAGAGTCGAGGAAACTAT
ACAAGTTACCACACTAAAGATATATATATTTATTGTACAGATTCTTTGTACTGCATCGTTCTTCTTCCCTTGCAATCGAATTGAAT
CTTGACGTTTATGTATTAATCCATCTTAATGATCTTTATTGCGAAAGATACGAACATGTAACGGTTGATGTCTATTACTTCTTTTG
CT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB83612 syntaxin-like protein [Brassica oleracea]12522e-135
XP_002873796 hypothetical protein ARALYDRAFT_488543 [Arabidopsis lyrata subsp. lyrata]12047e-130
NP_197185 syntaxin-21 [Arabidopsis thaliana]11698e-126
AAM66128 syntaxin homologue [Arabidopsis thaliana]11643e-125
XP_002274100 PREDICTED: hypothetical protein [Vitis vinifera]8857e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q39233 Syntaxin-2111694e-127
P93654 Syntaxin-228064e-085
O04378 Syntaxin-237133e-074
Q9C615 Putative syntaxin-244661e-045
O15400 Syntaxin-73182e-028

TrEMBL top hits (Blast detail)Scoree value
A6M8U5 Syntaxin-like protein12521e-135
Q1WW70 At5g1683011696e-126
C6TA84 Putative uncharacterized protein8765e-092
Q8LJR4 Syntaxin8765e-092
A5BYQ4 Putative uncharacterized protein8561e-089

Arabidopsis top hits (Blast detail)Scoree value
AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor11756e-129
AT5G46860.1 VAM3; SNAP receptor8064e-086
AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor7151e-075
AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor7132e-075
AT1G32270.1 ATSYP24; SNAP receptor/ protein binding4661e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
121  33%

Unigene MembersMember information