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Information for unigene UN47424
| FASTA Sequence |
| Unigene ID: UN47424 | Length: 1242 |
SSR | | ATGATGTTTCTCTCCTCGCCGACGATGCAGAAAGGAATATTCGTGAGCGTTCCGGTACTTGTCCTCTCCGTTCCATTCGCAGCTGC
TGTCTTCTTCCTCCTCTCCTCTTCTCTCTCCTCCTCCTCCTCCTGCTCATGTCCTTCTTCTCCGAACATAGCTTCCCTCGGAGGAA
GCGTTAGTGACGTGAGATTAGAGGAGAGGATATCGACGACGCCAGAGGATATAGAGTGGGTTAGGGATCTGATTAGATCCAACGGT
TTGCATATGCAGAAGAATGAGCTTAGGAAAGGCATCAATCCTCGCACTAGAGATCAGCAACTCGCAGATCTAAGACAGTACAAGGG
TATATCTCATTACGAAGGAGACGAAGCAAACAACCACACAGATCTTCCATGCCCTAGTGAGTTACTAGTCGAGCAGCATCACAGCA
ACTACGGTGAGCCTTGGGCAGGTGGCCGCGACGTATTCGAGTTCTTGGCTCAATCATCCAATCTCAAACCAAACTCTCGCGTCCTC
GAGATCGGATGCGGCACCTTACGGGTCGGTTTGCATTTCATCCGCTATCTCGATCCAAGACACTTCCACTGCCTTGAAAGAGACGA
GCTTTCTCTAATGGCTGCTTTGAGATACGAGCTTCCATCACAAGGTCTTCTACATAAACGGCCTCTTATACTCAGAGGCGAAGATA
TGGAGTTCAGCAAGTTTGGCTCGGATGTAAGCTATGATCTTATATACGCGAGTGCGGTCTTTCTTCACATGCCTGATAAGCTCGTG
TGGACTGGACTCGAGAGGCTGGTGGAGAAGTTAAAGCCTTATGAAGGGAGGATCTTTGTGTCGCATAATGTGAAGTTTTGTTCAAG
GTTAGGTGGAGACGAGTGTGGAAAGAAGCTAGCGAGTTTGGGGCTTGAGTATCTTGGTAAACAGACACATGATAGCTTGCTGTTTA
ATCACTACGAGATCTGGTTTGGGTTTAGGCGGGTGAAACCATAAAAAAAACAAAAATTTGTCGGAAGTAGTTTAAATATGGGTTTG
GTGACACGACATCGCTCTCCATTATCTGAGGATTGGATCAGAACTTGAAGGAGAGAAACGTCCACAAAAGCTTTGAAGTACACTCA
CTGAGAGATACGTGTATTGTGCATGTAATAGCCAAATGATATAAGATACGAGAGTAGATTCATATTATTCTGTAACCAAAAAATAT
TGTTTTCATATTTCAAGAGTTGTTAGCTTTTGTTTGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002882393 hypothetical protein ARALYDRAFT_317378 [Arabidopsis lyrata subsp. lyrata] | 1506 | 8e-165 |
| NP_187161 S-adenosylmethionine-dependent methyltransferase domain-containing protein [Arabidopsis thaliana] | 1482 | 5e-162 |
| XP_002328526 predicted protein [Populus trichocarpa] | 1297 | 1e-140 |
| XP_002512268 S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] | 1281 | 1e-138 |
| XP_002319611 predicted protein [Populus trichocarpa] | 1271 | 1e-137 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9MAA9 Putative uncharacterized protein At3g05100 | 1482 | 3e-162 |
| B9MZK0 Predicted protein | 1297 | 9e-141 |
| B9REU9 S-adenosylmethionine-dependent methyltransferase, putative | 1281 | 7e-139 |
| B9I895 Predicted protein | 1271 | 1e-137 |
| A5ASW2 Putative uncharacterized protein | 1215 | 3e-131 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G05100.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Methyltransferase type 12 (InterPro:IPR013217); Has 53 Blast hits to 53 proteins in 21 species: Archae - 2; Bacteria - 27; Metazoa - 0; Fungi - 3; Plants - 11; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). | 1482 | 2e-164 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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