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Information for unigene UN47433

FASTA Sequence
Unigene ID: UN47433Length: 1914 SSR 
GTTAACGAAATGCTGTTCATAATCCGAGGCCGGTTAGAGAGTGTGACCACAGATGGAGGAAGAAGCGGTTTCTTCAACAGGGGGTT
ATTAAAAGAAGGAGACTTTTGTGGTGAAGAGCTTCTGACTTGGGCACTTGACCCTAAAGCAGGCTCGAACTTACCTTCCTCCACAA
GAACAGTTAAGGCTCTGACCGAAGTAGAGGCTTTCGCCCTCGAAGCTGAAGAGCTCAAGTTTGTAGCGAGTCAGTTTAGGAGACTT
CATAGCCGACAGGTTCAACAGACTTTTAGGTTTTACTCTCAGCAATGGAGAACTTGGGCTTCTTCCTTCATCCAAGCTGCTTGGCG
TCGTCATTCGAGAAGGAAAAACGCTGAGCTGAGACGGATTGAAGAAGAGGAAGACGAGATGGGTTATGAAGATGAGTATGATGATG
ATGATGATGATGATGCTGAGGAGGAAGACGAGAGGACTCCAGTGTTCACAAGAACCGAGTCTTCTTCTAGACTACGTTCGACTATA
TTTGCATCAAGATTTGCTGCTAATGCATTGAAAGGTCACAGACTAAGGAGCACAGAGAGTTCAAAGAGGTTGTTGAATCTGCAAAA
GCCTCCTGAACCTGATTTTGATGCTGAATAAATGATTTATACACATAAATGCTATATATATATATGTAACTTGTTTCACAAACTTT
TTAAGATTATCTACACGAGAGCCAATGATCCCTCAAAGACCTGCATTGCATTTTTAACAGCCCCTACGTCGATATCTGCTAGATTT
CCAGTCTTTGAAGCAACAATGACACAGTTACTCCTCTCTTCTGCGTCTGGTACAAATAGCTTCGCTTTCTCTTCTGAAGAGAACAA
CCCAATACTGGGTTTGTCTCGAGCATTAGCTAGTTGAATAGCAGCTGTGTTTGTAGCGATAACTCCAGCAGAATCGTTTATCAGGG
CAGCCAACTGTCCTGGTGTTGTGATGAGCACTATAGATGTATCATCACCCACAAATTCTTCGACGTTTTCTCTCTCTTTCTCATGT
GGAATCACATAGACCGGCTTGAATCCCCTTATACCCCTTGATATCTGACCCCATTTAGTAAGTGGAAGCAAACTATCACTATCTCC
TTTAGATTGCATTGATGCCTTTGAATCTGATTCGATCCCATGGATCACTATAAACTTCCCTGTCTCCACTCCAGCTTTCCTATACT
TGTCAGCCACAACCTCTTTCAATCTCCGTGAAACCGACACCCTAAGTGGCAGCACAGGAGTCCTTGGAACACTCCTAAACGGCCTT
CCTAACCAATCCTCCATCTGGTCATACATTTTGTAACCTAATTCTGAAAGGTTGGTGTTTTCTGCTGTAAAGGTCTCAGATAGCAT
CAGACCAGCCCCAGCAGAGTTAACATTCGGGTAAATGTAACTAGCTCTGTCTCTAGCCGTTGTCATGAACAAGAACGCTGCGTGGC
CTAGCCCTGCAAGCTTCGTTGACAGAATCATGTCATAGTACCTTCCTTTGAGAAGTCCGATCATGTCTGTATATTCAGCAGGCTCA
GGCCAATGATCGTCTGGATCGTACACATTTGCCCACCTCACGTTTTTGTTTAACTCGTACGTTTGTTTTCCTCTCTCTGTCGTTAA
GACATCTACCTGAACACCAGGGTACCTGTCTTTAAGTAGCTGAATCGTCGGGAAAAAGAGTAGATTCTCGTACACTCCACCGGAGA
CGACGCAGCAGCACCCATTGGGAACTTCAAGAACCCGTAAGGATTGTCAGGATTATCCGGTGGTCTCGGATCCTCTTCTTGCTTTC
CGTCGCGAACAGTGACCCGTATTCGTTGTTGAGGTCTTCGCCGTCGTCAAAGGGGTCGAGCCACACGCTCTTCTTCTTCTTGAGGT
TGACTGATACATCCAAGGGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890140 hypothetical protein ARALYDRAFT_471797 [Arabidopsis lyrata subsp. lyrata]16404e-180
NP_563986 NDH-dependent cyclic electron flow 1 [Arabidopsis thaliana]16361e-179
XP_002512720 conserved hypothetical protein [Ricinus communis]14074e-153
AEK94315 hypothetical protein [Pyrus x bretschneideri]13708e-149
ACU18065 unknown [Glycine max]13483e-146

Swiss-Prot top hits (Blast detail)Scoree value
Q9S9N5 Putative cyclic nucleotide-gated ion channel 79563e-102
Q9FXH6 Putative cyclic nucleotide-gated ion channel 88515e-090
O82226 Probable cyclic nucleotide-gated ion channel 65999e-061
Q9M0A4 Putative cyclic nucleotide-gated ion channel 95971e-060
Q8RWS9 Probable cyclic nucleotide-gated ion channel 55666e-057

TrEMBL top hits (Blast detail)Scoree value
Q9S9N6 At1g15980/T24D18_816368e-180
B9RGL1 Putative uncharacterized protein14073e-153
C6T8B3 Putative uncharacterized protein13482e-146
B9N9Y2 Predicted protein13186e-143
B6SP99 Putative uncharacterized protein12093e-130

Arabidopsis top hits (Blast detail)Scoree value
AT1G15980.1 NDF1 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)16373e-182
AT1G15990.1 ATCNGC7 (CYCLIC NUCLEOTIDE GATED CHANNEL 7); calmodulin binding / cyclic nucleotide binding / ion channel9572e-103
AT1G19780.1 ATCNGC8 (CYCLIC NUCLEOTIDE GATED CHANNEL 8); calmodulin binding / cyclic nucleotide binding / ion channel8515e-091
AT2G23980.1 ATCNGC6; calmodulin binding5998e-062
AT4G30560.1 ATCNGC9 (CYCLIC NUCLEOTIDE GATED CHANNEL 9); calmodulin binding / cyclic nucleotide binding / ion channel5971e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  100%

Unigene MembersMember information