RadishBase

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Information for unigene UN47435

FASTA Sequence

Unigene ID: UN47435	Length: 780	SSR
ATATGTGAGCCAAAAAAATAAGTGAGAAGGAAACAAATGGGTTATAAGAAATGGATGAGTATTTGAACAGAAGATAAATTAACTCA AGAAGGCAAAGATGAATCTTGTATTACTTTACATATATAAACTCAATGATTCATACCTGCAAAACTGATTTGCCCCACCTCTCTCT CATTTTTTCTTAAAATCTGAAGCTAAGAAGAAGAAGAAGCTCCAGGGTTTTAAGGGCAAATCATTTCACAAATAACTAATGATTGA TGACCGGGGATGGAAGAGGTGATGTTGGGGGCTTCATGTCCTCATACATTGTGTAAGGTGGCAATGGTCTTGGCTTTGGCGGATTA GCTGCACTTTCTTCTGGTGTAAGGGAAGTGTCTGTCACATTGTTAACAGTTTCTGCTTCTGGCAAGGAAGCAGATTCAGTCGTTTT TACACTACCATCGACTGTTTCCACCACGTCATTGCCTCCAGGCAACTCTGAGTTTTCTTCTGCAGGTGCTGTTTTCTTGGGACCAG TTGATGCAGGAGTTGGTGAGGTTGGTGGTTTCAGGTCTGCGTAAGCTGCATAAGGAGAAAGAGGTCTCATTTTTGGTATAACTGGT GCTTCTGCCTCCTCAGTGACACTTATTTCAACTGTTGAGCTTTCAACAGTACCAGAATCGGTTGGAACAGGCGCCGCCACAGGGTC GCTCTTGCGGATACCTGAAGCTTTAGGAGTGGGTGATGAAGGGGGTTTTAGATTGTCATAGCTAGCATAAGGAGAAAGAGGCCTCT CTTTCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
ABV89636 catalytic/coenzyme binding protein [Brassica rapa]	682	1e-069
XP_002883157 catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata]	453	5e-043
BAB03098 unnamed protein product [Arabidopsis thaliana]	422	2e-039
NP_188519 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana]	422	2e-039
BAJ87171 predicted protein [Hordeum vulgare subsp. vulgare]	283	2e-023

Swiss-Prot top hits (Blast detail)	Score	e value
Q9M158 Uncharacterized protein At4g01050	127	1e-006

TrEMBL top hits (Blast detail)	Score	e value
A8IXN4 Catalytic/coenzyme binding protein	682	9e-070
Q8H0U5 At3g18890	422	1e-039
Q9LHN0 Gb\|AAC26697.1	422	1e-039
B9RZD4 NAD dependent epimerase/dehydratase, putative	189	1e-012
Q8SKU2 Tic62 protein	180	1e-011

Arabidopsis top hits (Blast detail)	Score	e value
AT3G18890.1 binding / catalytic/ coenzyme binding	423	6e-042
AT4G01050.1 hydroxyproline-rich glycoprotein family protein	127	1e-007

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


7	2			100%

Unigene Members	Member information