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Information for unigene UN47444
| FASTA Sequence |
| Unigene ID: UN47444 | Length: 1052 |
SSR | | AGTGTAATACAGTTTTACAAAAACTTCCTGATAGCGATTACTCATAAACAACAAAATGTAAATTTCTTCACCATACATAAAGAAAG
AAACGGAATTGTAGATTAACAAACGCTTCTCATAGACAAAGCTAAAATTATCTCTACAGCTTTACAACATCGAAGAGCTTGAAAAA
TGTAAGAAAGATTAGGCAGAAGCTGCAGGTTCTGAAGCAGCTGCTTCGGCTGCAGCAGCTCTCTTCTTAGCAAAGTACTCATCTGC
TCGCGCTTGGTTCTTAGCAACCGATGGCTTCACCCACTTCTTTCTTCCGGGCAACACAGTGAGTGTACAACCTGAAGCTTCAAGCT
TCTCCTTTGCCGATGTCGAGAAAGCACGGGCTTTGAAGGTGAGCTTCACGCTAAGTTCTCCCGTACCAAGAATCTTAAGAGGGAGT
TTCCTTTCCCTTCCAGAAGGATTGATCAAACCCTTTTGCTTCAATGTCTCTAGCGACACTTCATCTCCATCTTCAAACCCAGCTGT
TTCAATGTCTTTGAGATTCACCGGTACGTACTTGGGTAACCCTGCACGCATACCTCCAGCGATTCCTCTAAGTTTGGGAAGACGGC
GATAAAGAGCGGTTTGACCTCCTTCAAAGCCTCTCATGATCCCAGGACCAGACCGCGACTTCTGTCCCCTCATCCCAAACCCGCAG
CTCGCTCCTTGTCCCGCGGAGATACCTCTACCCTTTCTCTTCGCCCTCTTTCTCGAACCGGGTTGTGGTCCGAGGTTATCCAGACG
GAACCTCTCCGAGCTCATCACTGCTGCTTCCGGAGAAGAAGAAGAAGAGGTCGCCGCCGTCACAACGAGAGGTCTCGCGATTCGCT
GTTGTTGTTGTTTTCCGATTCTACGATCGTGGTGGAGTTTCAGAGAGAGGATCTGGTGAGATGGGTTTGCTCCTAAGACACTTACA
TTGCCCTTGAATGAAGTGGGAGGGAACAAGAGGCGGGAGGTGAGAGAGTTTGATGAGATGGAGAGAGGAACAGCCATGGAGGAGGG
CATCAACAAGAGATGAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189221 50S ribosomal protein L15 [Arabidopsis thaliana] | 1140 | 2e-122 |
| CAA77593 Plastid ribosomal protein CL15 [Arabidopsis thaliana] | 1132 | 1e-121 |
| XP_002876939 hypothetical protein ARALYDRAFT_484358 [Arabidopsis lyrata subsp. lyrata] | 1130 | 2e-121 |
| CAA77592 plastid ribosomal protein CL15 [Arabidopsis thaliana] | 1117 | 8e-120 |
| XP_002531621 50S ribosomal protein L15, putative [Ricinus communis] | 888 | 3e-093 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P25873 50S ribosomal protein L15, chloroplastic | 1140 | 7e-124 |
| P31165 50S ribosomal protein L15, chloroplastic (Fragment) | 816 | 3e-086 |
| Q2JV94 50S ribosomal protein L15 | 276 | 1e-023 |
| P31160 50S ribosomal protein L15 | 270 | 6e-023 |
| Q5N0U8 50S ribosomal protein L15 | 270 | 6e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T052 50S ribosomal protein L15, putative | 888 | 2e-093 |
| C6SYC0 Putative uncharacterized protein | 861 | 3e-090 |
| B9HJ33 Predicted protein | 839 | 9e-088 |
| A9NYS3 Putative uncharacterized protein | 806 | 6e-084 |
| B4FUZ9 Putative uncharacterized protein | 791 | 3e-082 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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