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Information for unigene UN47445

FASTA Sequence
Unigene ID: UN47445Length: 1074 SSR 
GGAATTTCTTACAGCTGGGCTCAGAAGGAGTGGATCCGAAGGTTTACGATGACGTAATCGGAGTGACCGAGGAGGTAGTTGCGTTC
GTGAGGGATCTCGCGATGAATCCCGATACTTGGTTGGATCTTCCTTTACCTGATGATGATGATGATGATGATGGTACCTTTGATGA
GTTTGAAATGAGTGATGATCAGCACGAGCATGCTGTGGCTGTTGAAAGGCTTGTACCGAGCCTTGCTTCTTTGAGGATTGAGCTTT
GCCCTGAATACATGAGTGAGAATTGCTTCTGGATGATTTACTTTGTGCTTTTGCATCCTAAACTCAGCCAACACGATGCCTCGCTT
CTCTCCACTCCTCAGGTACTCGAAGCAAGAGCAATGTTATCTCACGAGTTACAGAAATCAAACAGAGCACCTGTGGAAGAAGCAGA
GAGTTCTGAAGCTAACGCTGCAGTGGTTGAACCTCTTACCGTGCCTTATAACCCTTCACAGGAGTCATTAGCTGGTAAAACCGTAA
ATCCGCAGGAGTTTGAGACAGACAAGCACCCAGTTGAGAGCAAGGAGATACAAGTCGTTGACAAATCTGTCATTGAAGAAAGAAAC
TCATCAACTGATTCTTCTTCTTCGTCTAGATTTGTCAATGTGCAAGCTGAGGACGTAGAAGAAGAAGAAGAAGACGCAGATGATTG
GTTGAACGATGAAGAGAGTTCAGATGCTGTGAGCGGCATGGAAGGAGGAGTAACTCTAAGCATCCTCTTGGTGAAGACGAAGAAGA
TGTGTCATTCAGTGATCTAGAAGAAGATGATGATGACGAGGAAAGAGACGTACCCGTGAGTTCCAAGAGATCTACTAACTCTAGTT
CGCCAGACTGGGTACAGATATAAGACGGCAACGCGGGTCAGGTAAAAAGAGAACAACAGAATCAAACCATTGTCTTGATGTCGATG
AAATGTAATACAAATGACCACCTCTAGTGTTCTTTTGGTTATATAAACATAAAATCTCTCAAGTCTATCAAAAATCTGTTCGATGA
AAACTCATACGAGGGCTTTATTAGAAACTCCAAAATGTTTGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_569021 BSD domain-containing protein [Arabidopsis thaliana]8292e-086
CAA16672 predicted protein [Arabidopsis thaliana]6331e-063
XP_002310888 predicted protein [Populus trichocarpa]5641e-055
XP_002267363 PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]5641e-055
XP_002267436 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]5505e-054

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701721e-011

TrEMBL top hits (Blast detail)Scoree value
Q9FHP0 Genomic DNA, chromosome 5, TAC clone:K14B208291e-086
B9HFZ2 Predicted protein (Fragment)5647e-056
Q9M2X8 AT3g49800/T16K5_1505128e-050
Q0DNW5 Os03g0729900 protein (Fragment)5064e-049
Q70KS2 BSD protein (Fragment)5064e-049

Arabidopsis top hits (Blast detail)Scoree value
AT5G65910.1 BSD domain-containing protein8298e-089
AT3G49800.1 BSD domain-containing protein5125e-052
AT1G10720.1 BSD domain-containing protein3871e-037
AT1G26300.1 BSD domain-containing protein1371e-008
AT1G69030.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST Arabidopsis thaliana protein match is: BSD domain-containing protein (TAIR:AT1G26300.1); Has 173 Blast hits to 173 proteins in 34 species: Archae - 4; Bacteria - 4; Metazoa - 52; Fungi - 10; Plants - 92; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).1164e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information