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Information for unigene UN47547
| FASTA Sequence |
| Unigene ID: UN47547 | Length: 1229 |
SSR | | GAGCAACCAACAAATTTATTTCATAGTTTTGCTTGAAAATGACTCTATTACGAAAACAATATTCAATGAAGTTTTGGCCTCTCTCG
ACCACCGAAATTAAAGAAGAAAACAGTGTTGCTCTTATTCTCTCTCTCTCTCTGCTTAATGTTTTGTTTCTCAGTGTTTGTTGGAC
GAATCTAGTTCCCGGACATACTTCTTTGCCTGTTCAAGGGTCAAAAACATGATGACGTTCCATGAGCCAAGACGTCCAAAGTTGGG
GATGAAACCCTTGTAGAATGCCATAGGACCGTCCGCCTTCAGAGTTTTAACGAAGCAGTCGATAGTGCCTTTGTAAGAAGGATCTC
CCATCATTCTTGACTTAACCACGTCGACAGGGGAACCAATGCACACAGCAAAGAACCCTGCTCCCAGTCCAGAGAGAATATGTGTG
ACAATGTTATCAGTGAAACCCGGGATCTTCAAGATTGTCTGCTTCACTTGATCGTAACTCGCTAGTTCAGCAGCATTGATGATTGC
GTTTCTTGCCACGTTAGGTCCAAGACCAGTCCAAAGAGCTCGGACTCCTTCCTGTCTAACGATAGTTGAATACGCATTCAACGATC
CACTATACCGTTTTGGCACACCTGCAGGTAGTTTCCCTTCAGCCTGAAGTCTAACTTTCACAAGATCGGTGAGGTTCGCCACCATG
ATACCCAGCGCACCTGTTGTCAAACCAGCAAGGATTTTCTTGCTCAATGGAACATCACCAACATGATCTTTCCCAACGTACAAGTT
TTTGACCGGCTCATACATTCCGATCCTTAGACCACCAAACAAGCATTGGCGATGCAGTCCAGGTACAACACCTTTCCATAGTGAAC
GAAGCCCTTCTTCCCTTGCAATGGTACCAACAGTTCCCAGCAAACCCCGATACTTAGGCAGAGTGAGATCTCCAGCTATGGCAGAC
TTTTGAAGCTGAAGCCTAACCTTCGCAGTGTCCAACGGAATCGTACACACCTCGGCGATACAGGCGGCGAAGGCGCTGCAGGCGAA
TGTTTTGGGCAACGAAAGGTCGGATTTGCTATCGGCCACCATCTTCGACGATCCAGAAAAGATACGAGGGAGTTAGGGATTTCGAG
TCTCGGGATGAGTGACGACGGCTACGCAACTTGACGTCGAGAGTTTCAGTTGGGAAAGATCGTCCGTCTCTCTCTCTGCACTGCTA
CGAAATGAACAAAGGTAATGGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_190979 uncoupling mitochondrial protein 1 [Arabidopsis thaliana] | 1463 | 8e-160 |
| CAA11757 plant uncoupling mitochondrial protein [Arabidopsis thaliana] | 1454 | 8e-159 |
| XP_002527871 mitochondrial uncoupling protein, putative [Ricinus communis] | 1359 | 9e-148 |
| XP_002308202 predicted protein [Populus trichocarpa] | 1353 | 4e-147 |
| XP_002322953 predicted protein [Populus trichocarpa] | 1339 | 2e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P70406 Mitochondrial uncoupling protein 2 | 686 | 4e-071 |
| P56500 Mitochondrial uncoupling protein 2 | 686 | 4e-071 |
| Q9W725 Mitochondrial uncoupling protein 2 | 684 | 7e-071 |
| Q9N2I9 Mitochondrial uncoupling protein 3 | 683 | 9e-071 |
| P56501 Mitochondrial uncoupling protein 3 | 682 | 1e-070 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O81845 Mitochondrial uncoupling protein | 1463 | 5e-160 |
| O65623 Plant uncoupling mitochondrial protein | 1454 | 6e-159 |
| B9SPF2 Mitochondrial uncoupling protein, putative | 1359 | 6e-148 |
| A9PAU0 Predicted protein | 1353 | 3e-147 |
| B9IG38 Predicted protein | 1339 | 1e-145 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G54110.1 PUMP1 (PLANT UNCOUPLING MITOCHONDRIAL PROTEIN 1); binding / oxidative phosphorylation uncoupler | 1464 | 2e-162 |
| AT5G58970.1 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler | 1132 | 7e-124 |
| AT5G58970.2 ATUCP2 (UNCOUPLING PROTEIN 2); oxidative phosphorylation uncoupler | 891 | 6e-096 |
| AT2G22500.1 UCP5 (UNCOUPLING PROTEIN 5); binding | 520 | 6e-053 |
| AT1G14140.1 mitochondrial substrate carrier family protein | 476 | 8e-048 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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