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Information for unigene UN47561
| FASTA Sequence |
| Unigene ID: UN47561 | Length: 1403 |
SSR | | CCTAGGAAGAGTCCAATTTTTCTTCTTTGTCACAGACACAGTCTGGAAAGCATAACGGTTTTCAATACTTGAGTAGCCGATTAGAA
AGCATAACGGTTTTCAATACTTGACTAGCCGATGGTGTATAATATCAAAAAAGGCAAGATCATGCTTTAAAGCTCTAGAGATGAAA
GTTTTGGCTTTTTCTTCTTATCGCCGTGTTACACAAGCTCGATACTTGGAACACAGCTTAAAAACGAGAACTACAAGATGTTGTAG
CTTAAACCAAAAGCTCCACATTACATGGGAACATCTGGATCCAATCTTTTCTGAATAGCATTTGCACCCTCCATGTCCCCAATCTT
GTACAAGTAGACCATTTCTTCCTTAAGCCGAGCTTGTTCCTTCATAGCTTGAGCCATTCCGCCTTCCATTGATCGCTTTAGAGCTA
AAACTTCTTCTTCCTTCTGCTTTTCGCGTGCTTCCTGCATCTCTAGCCGGCGTTGCTCCTCGTCATTGAACACAGTCCGTTCACTC
TGCCCAGCTTTCTTCAAACCCTTCTTCATCTCTTTCTCCAACTTACGTCTATAGTAACCATCAATGTCATAGTACTTCTTGGAGGT
AAATGTACCAGTATTGTGATCTTCCATGAAATCTTTAAACATTTTCTTCTCTTCCCATGGTGGCAAGCTTTCCAAGTTGACCTCTT
TTACTTCAAGCAGCCATGCTGTGAACTCTGGTCGTTTATTCCACATATCAGTCTCTCTGATGACTCCATACTTGCCCCAAGATTCA
GTAACAGCTCCTTTCTTGGCTTTCTCAGACTTCTTCTCCTTCTTCCGCTTCTTCTTCTTGCTGCTATCATCTCCTTTCTCCTTCCT
TCTCTTCTTCTTCTTCTTCTCTTTCTCTCTCCTCCTTCTCTTCTTATCTCTCTCCTCCCTCTCCCTTCTCTTCCTCTTCCTTCTCC
TTCGCTCATCCTCACCCTCGCTCTCCTCGGAATCCGAATACTCAGACGAATACTCCGACTCAGATTCCGATTCCGAGCTACTACTG
GAATCATCGCGGCGTCTCCTGCTTCGTCTACTACTACTACTACGAGATCTCCGATCTGATTTCCTTTTCCCTCTCGACTTGCCACT
TCTACGTCTCTCTTCCTTCTCCGACTCGGACTCGCTACCACTCTCCAGTCCCGAACCAGAATCGGAGTCTCTGCCGTCTTTTGATT
TTCTCTTTGATTCGCGGCGACTCACATCTTCTTCGACCGGCTTCTTTTCGATACGGCTCGATTTCTCCCGGGATGATTCTCTTCTG
TAGTCTTTATCCTCGACGTCGCATCTCGCCTTCTCCGGCGGAGAGTCGTCGCGGTCTCTTCCCATCTCGCAAAATCGCCGGTGAGT
TACCCCCTCGACTCAACCCTAGATCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568799 uncharacterized protein [Arabidopsis thaliana] | 1414 | 4e-154 |
| AAM63475 unknown [Arabidopsis thaliana] | 1411 | 1e-153 |
| XP_002864283 hypothetical protein ARALYDRAFT_331729 [Arabidopsis lyrata subsp. lyrata] | 1314 | 2e-142 |
| BAB09552 unnamed protein product [Arabidopsis thaliana] | 1124 | 2e-120 |
| XP_002282222 PREDICTED: hypothetical protein [Vitis vinifera] | 968 | 2e-102 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49756 RNA-binding protein 25 | 235 | 1e-018 |
| Q8H0U8 DEAD-box ATP-dependent RNA helicase 42 | 231 | 3e-018 |
| A1A5I1 Protein FAM133 | 220 | 5e-017 |
| Q55FI4 Nucleolar protein 58 | 213 | 3e-016 |
| B2RY56 RNA-binding protein 25 | 209 | 1e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LCP8 Putative uncharacterized protein | 1411 | 7e-154 |
| Q9FHZ6 Genomic DNA, chromosome 5, P1 clone:MGN6 | 1159 | 1e-124 |
| B8ASD2 Putative uncharacterized protein | 959 | 2e-101 |
| Q7X8Y1 OSJNBa0074L08.19 protein | 959 | 2e-101 |
| B9SNN8 Nucleic acid binding protein, putative | 957 | 3e-101 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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