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Information for unigene UN47569
| FASTA Sequence |
| Unigene ID: UN47569 | Length: 949 |
SSR | | TTTTTTAGGGAAAGGTCAAAATCCATAGCATCAAATTACAGATCACAACTTAATGCGTTCAATACAACTCACGAACAAGGGCGTAT
ATAATAGCAGACACACAAGTGTCTGGGACACGCAAGAAAAGGCTGAAGATATCGACGACAACCTTTGTTAAAAAAAAAACTTGGGA
TTTATTCAGAGTCAGAATCTGAACGAGCACTCTGCCTGACGCTCCTCCTGGTTTGTGTGGTAGCCTTTGGTTTATGAGATGATTCT
CCCTCGTAATGGATGACTTGAGCTCTAGCTAATCTCTCTTCCAGATCCTCAGTGCTGAAATCGTCTTTCCCTCCCAGCTCATTGAA
CCCAACCACATAATCATCCACTTTAGTGTTCTTGATGAGTGCAAGAGTTGGAAGAACTACAATCTTGAGCCTCTCAGCCAAGAAGG
GACTTTTCTCAGCTTGGATCTTCACAAAACGTGTCTCAACGCGCTGCTTTGCCAATATACCCAAGTGTTTATCCATCACTTTGCAA
GGCCAATTCTCGCGGTAGAAATGGCAGACGACGCGTTCGCTGGCCTTGACGGCGGCGAAGAAGTCTTTCTCGGAAGGGATCTCGGT
GTACTCTCCGTGTCCATGGCTCATCCAACGTTTCTTTTTCTCTGCCATTCTCTTCATCTGCTGCAGCCTCCTCTCCCTCAACACCT
CCAGATCGTCCTCGTCGGGCTTCTCCAGCGACGCGATCTCCTCGTCGAGCTTGTCCTCCATCGCTTTCGCCACCGTCAGAAGCTGC
TTCTCCAGAATCTCTTGAATAGGATTATCCATTGTGAAAACGCCGGCGAGATCTGTCGGACGGAGGAGCCTCGTTATTTGAATTCG
AACAGAGAGATTCAGTTTTTAGCCTTTTAGGTGACGAATGAAATCGAGAGAGAGAGAGAGAGAGAGAGAGGCGCAAAATAGAAGAT
CCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875261 hypothetical protein ARALYDRAFT_484316 [Arabidopsis lyrata subsp. lyrata] | 965 | 3e-102 |
| NP_566772 thioredoxin family protein [Arabidopsis thaliana] | 958 | 2e-101 |
| AAM65963 putative ATP binding protein [Arabidopsis thaliana] | 958 | 2e-101 |
| NP_179489 thioredoxin domain-containing protein 9-like protein [Arabidopsis thaliana] | 954 | 5e-101 |
| XP_002884179 hypothetical protein ARALYDRAFT_480833 [Arabidopsis lyrata subsp. lyrata] | 948 | 3e-100 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O64628 Thioredoxin domain-containing protein 9 homolog | 954 | 2e-102 |
| O14530 Thioredoxin domain-containing protein 9 | 536 | 7e-054 |
| Q9CQ79 Thioredoxin domain-containing protein 9 | 526 | 1e-052 |
| O18883 Thioredoxin domain-containing protein 9 | 524 | 2e-052 |
| Q8K581 Thioredoxin domain-containing protein 9 | 520 | 5e-052 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L9H7 Putative ATP binding protein | 958 | 1e-101 |
| Q9LSU4 Genomic DNA, chromosome 3, P1 clone: MWL2 | 958 | 1e-101 |
| Q541V3 Putative ATP binding protein | 954 | 4e-101 |
| A9PC45 Predicted protein | 830 | 9e-087 |
| B7FMC0 Putative uncharacterized protein | 829 | 1e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G25580.1 thioredoxin-related | 959 | 6e-104 |
| AT2G18990.1 TXND9 (THIOREDOXIN DOMAIN-CONTAINING PROTEIN 9 HOMOLOG) | 955 | 2e-103 |
| AT3G50960.1 PLP3a (Phosducin-like protein 3 homolog); beta-tubulin binding | 363 | 7e-035 |
| AT5G66410.1 PLP3b (Phosducin-like protein 3 homolog); beta-tubulin binding | 363 | 7e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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