Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN47584

FASTA Sequence
Unigene ID: UN47584Length: 971 SSR 
ACATCAAGTTTTATTAATTTTGAAATGAAAATAGATTACATACTAATAAATTAAGCCCGGGTAAAAACGAAACATGTGACTTAATA
ATAATATTCAGGAGGATAATGCTGGAGGAAAAGAACCTCCATCTCTCCAGAAGGCTGCTTCGCTATCAACCTATCTTTACCAATTG
GACTGTTAGATAAACTGATACTCGTTTCATAAACGTCTGGATAGACACTTTCACCTATAGTAAACTTGTAATACGAGTCAGTCATG
TGGATCCGGAACAAACTATCTTCCCTTCCCTCAACTCCGTTCAGGACTACTTCACCATTTGCTACTCTCCAAACCCCTGATTCGCC
GCATTGACTTGGGTTTACGAACTTAATGCTAAGTTTAGTTGATTCACGTATGACAGTATCTGGTGTTGATGATGGTAATATAAACA
TAACGGGCTCGGGTGCTATAGTTGGTCTAGTGAACATTACCGGTTGGTGTGGGCATGTCTTGGGATCTGAGGAACTTGGATTCATT
CGGCAAATCCACATGTTGTAGTCGGCCGACATGAAGCTGATGTAATAGGGAACGTTGGGCAAGACTTGCCCTCCGTCGACAGAAAA
CACTACGTCCTTCACCACGGGCGGTAAGGGCGGTCCTTGAATACCAGGGGCCGGGGCCATGCTTGGCTCAGGGACGCCACTCACTT
GTCCAACAACACCAGGCGGTCCTTGAATACCAGGGGCCATGCTTGGCTCAGGGACGGCACTCACTTGTCCAACAACACTGGGCGGT
CCTTGAATACCAGGAGCCATGCTTGGCTCAGGGACGCCACTCGCTTGTCTGGGATGATGTTTTTCTTTTTTTTTGCAACTAACACC
AGATGATGTTGTTATTACAACGACCAAGAAACAGATCATGATCAATCGCGATGTTGTCATATTTGTGTATGTTTATTTCTGAGTTT
TTGTTTCTTTTGTGTGTGTGTGTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187083 Kunitz family trypsin and protease inhibitor protein [Arabidopsis thaliana]4448e-042
XP_002882342 endopeptidase inhibitor [Arabidopsis lyrata subsp. lyrata]4431e-041
NP_187082 Kunitz family trypsin and protease inhibitor protein [Arabidopsis thaliana]4393e-041
AAF26782 putative trypsin inhibitor [Arabidopsis thaliana]4393e-041
AAP40451 putative trypsin inhibitor protein [Arabidopsis thaliana]4393e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q7LZR2 Collagen alpha-1(VIII) chain1227e-006
Q00780 Collagen alpha-1(VIII) chain1227e-006
P14282 Collagen alpha-1(VIII) chain1227e-006
P27658 Collagen alpha-1(VIII) chain1211e-005

TrEMBL top hits (Blast detail)Scoree value
Q9M8Y9 Putative trypsin inhibitor4445e-042
Q0WNE5 Putative trypsin inhibitor4392e-041
Q7Y212 Putative trypsin inhibitor protein (Fragment)4392e-041
Q9M8Y8 Putative trypsin inhibitor4392e-041

Arabidopsis top hits (Blast detail)Scoree value
AT3G04330.1 trypsin and protease inhibitor family protein / Kunitz family protein4443e-044
AT3G04320.1 endopeptidase inhibitor4391e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  67%
 
121  33%

Unigene MembersMember information