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Information for unigene UN47585

FASTA Sequence
Unigene ID: UN47585Length: 1375 SSR 
AGATGTTACCTTCCCATACATTTCATTACAAACATTACACTACTAGGTCTGGAGCTAGACTACTACCCTTAAAAGCCTTTCTTCTT
CAAACTCTCATTAAAGTTACTTTCAGCCAAAACAAAGTTACTTTCATCAGAATGATAAAACTGTTTGGCCAAACAAGTGAGAGCCC
TTTTCCTTTTTTTTTTTACCTCTTACTGCACAAATCCTAATTTGATTCCATCTCGAATTCATCAGTCACAAAAGTGGTAGTAGTAG
TGGGGGAGGGAAAAGGAACAAAGAAGCCGACGACGACCAATTAGATGCAAAGATCTACTGAGGAGGATTCATCTCCGGTTTCACGA
CTGAAGAAAACGTGTCAGGGGGCTGAAAATGGTAAATAGCCATCGCCAATGAGACTGGCATTATGCAAAGCGCCTTTGACTGCAAA
AGCTGCATCGCTGCTCCAACGTTTTCTTCCATCAGCTTAGCCACTTGACGCTCTATCCCATCGTCTGACCATTTCTCCCACACTGC
TTGTGTCTCATCCTCAATTGATGAAAACAATGGCATTTCAGTGACTAGTGGAGCAACAGCACCGGCCCCACCAAGACGACTCATGC
TCAAGACCTTAACTTGGAGCCTGAGAAACTTTACATAATCCACAATCTCATCGATCACAGCAGCCCTGTCAGTCTTGTTGACAGTA
GGTACAAGTTCCTGCAACGCCCTGATCCGTTCTGCTATTCTTTCCCTACGCAGCCGCTCAGCGATGCTATGAGGATCAGTGGCCTG
ACCTCGCCTAGCCCTAACTCTAGGTCGGATTGAAGATTGTTGATGCGGCATTGGTGGAGGTGGCTGTGACATTGGCTGCCCATGGA
AAACAGGTTTCATGGAGGAACATCGATTATCAACACCAACAACATCATCTTGGAAACGTTTCCCACTTCCGTCGGGTTTAAGAAAG
CTTTGTCCTTTCCCTTGATCGAGGCTCAACCCCAACGGAAACATCCCGTTGTGAAACCCTAGAGGCCCACCACCACCACCACCACC
CATATGATTATTATGACTCCCTTCTTCCCCGGAACCGAGCTGAAGCATCATCGGCGGCGGTCCGCTTAACCCTCCGGGGAGTGCAG
AAAGACCACCGGAGCTGGAAGACGCGGAGAAGTTGGAGATTCCGAGGATCTGCTCGAAGAAATCGTCGGAAGGAGGTTGTTGATCC
GAGAGGTTATGGTTGTTGTTGTTGTTAGTAGCCATGGCAGTTAGGTGAGAGAGAGCTTGGGAGACCTCGAAGAAGAAAGAGCTCCA
CGCGAATCTACTTCTTCTTGGGGATGGAGTTGTTGAGGTGGATGATGATGATGACGATGGATTCTCTTTAAGCTAATGGCGACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34239 unnamed protein product [Thellungiella halophila]13284e-144
XP_002892144 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]12944e-140
NP_563672 transcription factor bHLH7 [Arabidopsis thaliana]12872e-139
NP_001184895 transcription factor bHLH7 [Arabidopsis thaliana]12406e-134
NP_567245 transcription factor UNE12 [Arabidopsis thaliana]12325e-133

Swiss-Prot top hits (Blast detail)Scoree value
Q93Y00 Transcription factor bHLH712985e-142
O22768 Transcription factor UNE1212332e-134
Q8S3D5 Transcription factor bHLH694241e-040
Q9ZUG9 Transcription factor bHLH664222e-040
Q9LSQ3 Transcription factor bHLH823334e-030

TrEMBL top hits (Blast detail)Scoree value
B9DFF4 AT4G02590 protein12324e-133
B9S4R9 DNA binding protein, putative9798e-104
B9GS74 Predicted protein9376e-099
C0JP11 Putative basic helix-loop-helix protein BHLH39062e-095
C0JP12 Putative basic helix-loop-helix protein BHLH47413e-076

Arabidopsis top hits (Blast detail)Scoree value
AT1G03040.1 basic helix-loop-helix (bHLH) family protein12984e-143
AT4G02590.1 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor12341e-135
AT4G02590.2 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor12341e-135
AT4G02590.3 UNE12 (unfertilized embryo sac 12); DNA binding / transcription factor10432e-113
AT4G30980.1 basic helix-loop-helix (bHLH) family protein4241e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  100%

Unigene MembersMember information