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Information for unigene UN47611
| FASTA Sequence |
| Unigene ID: UN47611 | Length: 1357 |
SSR | | GGACCCTCCGATTGAACACAAAATTAGGGTTTCATTTTCCCCCTTTTCGACTTGCTTCTTCCCCTTTCAGAGCCGCTTCACTATGA
TTCTCCCCTCTTCTTCTTCTTCTCCTCAAGCTTTTGATTCTTCTTCTTGAATTTTGCAGATTTTTTTTTCCTCATTAATTTATAAT
AAATCTGCAAAAAAATATCTCTTCGATCCAAATGGGAAAATTCTGCTGCTTCACTTCCCCTTCCGAGGTTGTGGGAGGACAAGCAT
CATCACGATCTGGTAAAGGAAGAAGCGATGAAGGGCTGATCAAGTACGGTTTCAGTCTAGTGAAAGGCAAAGCTAACCACCCCATG
GAGGATTATCACGTCGCTAACTTCGTCAACAGCCAAGGCCACGAGCTAGGTCTCTTCGCTATCTACGACGGTCATATGGGTGATAC
TGTCCCTGCTTACTTGCAGAAGCACCTCTTCTCCAACATCCTCAAGGAGGGAGAGTTCTGGGTGGATCCACGAAGGTCTATAGCAA
AGGCTTACGAGAAGACGGACCAGGCGATTCTATCTAACAGTTCTGACTTGGGACGTGGCGGGTCCACGGCTGTTACTGCTATATTG
ATCAACGGGAGGAAGCTGTGGGTAGCTAACGTTGGAGATTCGCGAGCGGTTCTTTCGAGAGGAGGTTCGGTAATGCAGATGAGTAC
GGATCATGAGCCTCGTGCTGAACGGTCGAGTATTGAGGATAGAGGTGGATTTGTATCCAATCTACCAGGTGATGTTCCTCGGGTGA
ATGGTCAGTTAGCTGTGTCTCGTGCCTTTGGAGATAAGGGTCTTAAGACGCATCTGAGTTCAGAGCCTGATATTAGAGATGTTACT
GTAGATAGCCAGACTGATGTTCTTGTCCTTGCCAGTGATGGGATTTGGAAGGTGATGACAAATGAGGAGGCGATGGAGATAGCTAA
AAGGGTGAAAGATCCACAGAAGGCGGCTAAGGAGTTAACAGCTGAAGCATTGAGAAGAGAGAGTAAAGACGACATATCTTGTGTCG
TGGTCCGTTTCAGATGACAAAACTCTGGATTTCATCAAGAAAGAACACAAAAGCTGGATTACTGACTCTGATAAATTTTGGTTCCG
GTTTTGGACCGGTCTAAAGTTTTGGTTTCTGACAGCTTTCTTGCTATATAGCTTTTTATGTGCGTTCGTTGTTATGTAAATTGTGT
ATGTGTTTAAAGGAGGAGTTTGGTTGGGTGATGATATGGTGGGGTTGTGTTTATTATTATTGGTTGATTTGTTATATTTAATCATC
GTGACATAAAATATTAGGGCCTATTTTGAATAATATTTATATATGTGGTAGTACTTTTGTGTTTCGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564165 putative protein phosphatase 2C 9 [Arabidopsis thaliana] | 1368 | 9e-149 |
| XP_002890508 hypothetical protein ARALYDRAFT_472467 [Arabidopsis lyrata subsp. lyrata] | 1368 | 9e-149 |
| NP_001185062 putative protein phosphatase 2C 9 [Arabidopsis thaliana] | 1351 | 8e-147 |
| XP_002301055 predicted protein [Populus trichocarpa] | 1197 | 6e-129 |
| XP_002307378 predicted protein [Populus trichocarpa] | 1182 | 3e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LME4 Probable protein phosphatase 2C 9 | 1368 | 4e-150 |
| Q9S9Z7 Probable protein phosphatase 2C 10 | 1115 | 8e-121 |
| Q7XQU7 Probable protein phosphatase 2C 41 | 1019 | 1e-109 |
| Q8L7I4 Probable protein phosphatase 2C 17 | 1000 | 2e-107 |
| Q0JAA0 Probable protein phosphatase 2C 44 | 849 | 6e-090 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9GUW5 Predicted protein | 1197 | 4e-129 |
| B9H730 Predicted protein | 1182 | 2e-127 |
| B9RJK5 Protein phosphatase 2c, putative | 1156 | 2e-124 |
| B9RJK7 Protein phosphatase 2c, putative | 1140 | 2e-122 |
| A2Q6E4 Protein phosphatase 2C-like | 1081 | 1e-115 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G22280.1 protein phosphatase 2C, putative / PP2C, putative | 1369 | 3e-151 |
| AT1G34750.1 protein phosphatase 2C, putative / PP2C, putative | 1116 | 6e-122 |
| AT1G78200.1 protein phosphatase 2C, putative / PP2C, putative | 1001 | 1e-108 |
| AT1G78200.2 protein phosphatase 2C, putative / PP2C, putative | 1001 | 1e-108 |
| AT1G22280.2 protein phosphatase 2C, putative / PP2C, putative | 907 | 1e-097 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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