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Information for unigene UN47625
| FASTA Sequence |
| Unigene ID: UN47625 | Length: 838 |
SSR | | GGTGCCAACCGTTGTATCTCGAGATACGTGAGTTCTACGAAGGCTTACACATGAAAGTGGAACAGCAGATTCCTATGCTCTTGGTG
GAGAGATCAGCTTTAAACGAAGCTATGGAAGGAGAGAAACATGGACATCATCACTTACCTGAAACCAGAGGACTCTGTTTGTCTGA
AGAACAAACTGTCACAACAGTGTTAAGGAGACCAAAGATTGTTGCAGGCTACAAGCTGATAGACATGATCACTGAGCCTTGCAGGC
TGGTGCGTCGCTGTGAATTCACCGCTATTCTCATCTTATATGGACTTCCCCGTTTGTTAACTGGATCAATCCTAGCTCATGAGATG
ATGCATGCATGGCTTCGACTAAACGGGTATCCAAATCTTAGACCAGAAGTGGAAGAAGGGATATGTCAGGTTTTAGCTCACATGTG
GTTGGAATCTGAGACTTATGCTGGCTCTACATTGATAGACATTGCATCTTCTTCTTCTTCTTCTTCTTCTTCGTCTTCATCATCAT
CAGCCGCTGTGGCGATTGCATCGTCCAAGAAAGGGGAGAGGTCTGATTTTGAGAAGAAACTTGGTGAGTTTTTCAAGCACCAGATA
GAGTCAGATTCTTCATCTGCATACGGGGATGGGTTCAGGCAAGGTAACCAAGCTGTTCTTGCCCATGGTCTGAAGCGAACCCTTGA
TCATATTCGCTTGACCGGTACATTTCCTTAAATGGGATCATTTGAACGATAAAGAGATAAACAAAAAGGCTTTGCTATATAGTTTT
TAGAGTATAAACTGAGAAAAATGGGTTAAAATGTATAGTTTCAAATACACATTTGAAGAGTCGT
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002866988 hypothetical protein ARALYDRAFT_328082 [Arabidopsis lyrata subsp. lyrata] | 1115 | 9e-120 |
| NP_195404 LIM domain-containing protein [Arabidopsis thaliana] | 1072 | 9e-115 |
| AAL32677 Unknown protein [Arabidopsis thaliana] | 1068 | 3e-114 |
| CAB16816 putative protein [Arabidopsis thaliana] | 1010 | 1e-107 |
| XP_002533282 zinc ion binding protein, putative [Ricinus communis] | 983 | 2e-104 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C7Q8 LIM and UIM domain-containing At1g19270 | 595 | 8e-061 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8W4F0 Putative uncharacterized protein | 1068 | 2e-114 |
| O23197 Putative uncharacterized protein AT4g36860 | 1010 | 1e-107 |
| B9T4W3 Zinc ion binding protein, putative | 983 | 1e-104 |
| B9HEM0 Predicted protein (Fragment) | 934 | 6e-099 |
| B9MXT6 Predicted protein (Fragment) | 933 | 8e-099 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G36860.1 zinc ion binding | 1078 | 7e-118 |
| AT2G39830.1 DAR2 (DA1-RELATED PROTEIN 2); zinc ion binding | 818 | 1e-087 |
| AT5G66620.1 DAR6 (DA1-RELATED PROTEIN 6); zinc ion binding | 621 | 7e-065 |
| AT5G17890.1 DAR4 (DA1-RELATED PROTEIN 4); ATP binding / protein binding / zinc ion binding | 611 | 1e-063 |
| AT1G19270.1 DA1 (DA 1); ubiquitin binding | 595 | 8e-062 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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