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Information for unigene UN47653

FASTA Sequence
Unigene ID: UN47653Length: 1066 SSR 
GGTATTCATCTTTCTGTCACAATTCTGAAAAAAAAAATTGAAGCTTGATTTGGTTCAACAGAGAGAGAGAGAGAGAGATAAAGCAG
AGATGTGTAGTTTGTCAGCGAACATGTTGTTACCAACAAAGCTGAAACCTGCTTATTCAGACAAACAGAGTTATTGTACCACCAAC
TCACTCCTTGTCTCCAACACAAGACCCAAGAGGAAGAAGAACCAATCCACTGTTCCTATGGCAAGATTGTTTGGACCAGCTATCTT
CGAATCATCCAAGCTGAAAGTATTGTTTCTAGGGGTTGATGACAAGAAGCATCCACCAACGCTCCCAAGAACTTACACTCTGACTC
ACAGTGACATTACAGCTAAACTAACTCTAGCTATTTCTCACTCCATTAACAATTCTCAGTTGCAAGGATGGGCAAATAGGATATAC
AGAGATGAAGTGGTAGCAGAATGGAAAAAAGTGAAAGGGAACATGTCTCTTCACGTCCACTGTCACATTAGCGGTGCCCATTTCCT
CTTAGATCTCTTCCCAAAGTTTAGATACTACATCTTTTCCAAAGAACTACCCGTTGTGTTGAATGCTATTGTTCACGGAGATGGCA
ACCTGTTGAACAGCTATCCCGAGTTACAAGAAGCTCTTGTTTGGGTTTATTTCCATTCTAATGTCGATGAGTTCAACAGAGTCGAA
TGTTGGGGTCCGCTTTGGGAAGCTACTTCGCACGATGGTCACAGGACTCAGACTCTCCCTGAGACTCTGTGCAAGGAGGAGTGCGG
TTGTTGTTTCCCAACTGTTAGCTCCATTCCTTGGTCTCATAGTCTTACTAACGAAGGTGTTACTGACTACCCTGGGACTCAGGCCG
AGGGAATGTCTACTCCAAGTCCGGAGAAAATCTAGTGATTCAACTAATATACAAGTTTCTTTTTAGTGAAATCTTTTGTAGATCTA
ATATTGGTCTGGTTTGGTTTAGTGTACATGATGTGGTATAGGAAAATAATGATTATTTGTAGGTTTAATAGTACTAAATTAAGTTA
TAAATGTTTAATATTATGCGTCTCCACTTGAGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_567673 non-yellowing protein 1 [Arabidopsis thaliana]12002e-129
XP_002867744 hypothetical protein ARALYDRAFT_492573 [Arabidopsis lyrata subsp. lyrata]11993e-129
AAM64476 unknown [Arabidopsis thaliana]11941e-128
ADA58359 non-yellowing protein 1 [Brassica rapa subsp. campestris]10461e-111
NP_001118967 uncharacterized protein [Arabidopsis thaliana]9233e-097

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O82741 Non-yellowing protein 112001e-129
Q8LBZ2 Putative uncharacterized protein11947e-129
D2KKB5 Non-yellowing protein 110461e-111
B3H593 Uncharacterized protein At4g11911.19232e-097
Q66WT5 Non-yellowing protein 29179e-097

Arabidopsis top hits (Blast detail)Scoree value
AT4G22920.1 NYE1 (NON-YELLOWING 1)12016e-132
AT4G11911.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: NYE1 (NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits to 128 proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).9444e-102
AT4G11910.1 INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: NYE1 (NON-YELLOWING 1) (TAIR:AT4G22920.1); Has 130 Blast hits to 128 proteins in 45 species: Archae - 0; Bacteria - 50; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).9391e-101
AT1G44000.1 unknown protein4372e-043

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
122  67%

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