Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN47688

FASTA Sequence
Unigene ID: UN47688Length: 740 SSR 
GGCTTTTAGAGTTTTATTCATGTGACTATTTAGTTTTTTTTACATTTGGTCACAAGCTGTGACCTCTTTCTCAGATTAATCTTCCT
CCCATTTCACAGGATTGTGCAACCCGGTTCCTGATTGTAAACTGGTTCCCCTATGTAACTGTTGGGGTTGTACGGGTAGGGAAAGG
CGGACGGCACACCGTATCCTTGAGGAGATGGATAACAGGGAGGAGGAGGAGGACATGGATTACACGGCGGCGGACATGGTTTACAT
GGCGGCGGGCATGGTTTACAACAGGGCGCGGGCTTCTTCTCCTCTTCCTTCTTCTTGTCTCCATCTTTCTTATCGCCATCCTTTTT
GTCACAATCTTTCTTGTCACCATCTTTTTTGTCACCGTCTTTTTTGTCACCGTCCTTTTTGTCCCCATCCTTCTTCTCATCTGGTT
TCTTTGGAGGTTCGACTTTGCTTACGCTTACAAGCTCTGCAAAGGCTACCTTCTTTCTTAGCCTCTTGGTGAGGCCGATCATATCA
ACTTCAGTACCGGTCACCTCTATCTGGTTCCTGTGATCGCCTTTTATCTCCACGGCTGACACACCTTTAAACTGAACTGCTTTGGT
CATAGCTTTTGCTCTGGTCTTGTCATCAGTCATAGTCACTCTGAACAAGATCTTTTGCTTCATCTTCTTGCTTGCTTGAAGAGGAT
TGACTACAAGTCTTGAGTTTTGTGTAGAATACTACAAGTCTGAAGAAAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA98186 ATFP4-like [Arabidopsis thaliana]4311e-040
NP_568695 heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana]4311e-040
XP_002863883 hypothetical protein ARALYDRAFT_494881 [Arabidopsis lyrata subsp. lyrata]4311e-040
AAO22725 unknown protein [Arabidopsis thaliana]4274e-040
NP_001032032 heavy metal transport/detoxification domain-containing protein [Arabidopsis thaliana]3891e-035

Swiss-Prot top hits (Blast detail)Scoree value
Q32L04 Late cornified envelope-like proline-rich protein 11351e-007
Q8JFV8 Synaptic vesicle membrane protein VAT-1 homolog1323e-007
Q9LUI1 Leucine-rich repeat extensin-like protein 61225e-006

TrEMBL top hits (Blast detail)Scoree value
Q5PNZ7 At5g482904311e-040
Q9LK84 ATFP4-like4311e-040
Q84WQ2 Putative uncharacterized protein At5g482904273e-040
Q9SSF0 MLP3.5 protein3655e-033
Q9ZRE6 ATFP4 (Fragment)3655e-033

Arabidopsis top hits (Blast detail)Scoree value
AT5G48290.1 heavy-metal-associated domain-containing protein4317e-043
AT5G48290.2 heavy-metal-associated domain-containing protein3895e-038
AT3G07600.1 heavy-metal-associated domain-containing protein3653e-035
AT4G05030.1 heavy-metal-associated domain-containing protein1361e-008
AT3G22800.1 leucine-rich repeat family protein / extensin family protein1224e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information