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Information for unigene UN47698
| FASTA Sequence |
| Unigene ID: UN47698 | Length: 1006 |
SSR | | GGCCGACACCTCTTAACTTTTCTGTTCTGTTTTGTTTTGTTTTGTTTTACCACCGGACTTTTGCTTTTCCAGGTTCCAAAACGCAT
CTCCTCCTCCTCCTCCGTCTCCTAGGCTTCCTTGTCACGCAAACCTTTGAACCAACGAAAGCTATGAAGATCACCGCCCTGCTCGT
TCTCAAGGCCGCCCCCGAAACATCGGATCCAGTCATCCTCGCAAACGCCTCTGACGTTTCTCACTTTGGCTATTTCCAGCGATCCA
GCGTCAAGGAGTTCGTCGTCTTCGTCGGCCGCACCGTTGCTAGCCGAACACCTCCTTCCCAGCGCCAGTCCGTCCAGCACGAAGAG
TATAAGGTTCATGCTTACAATAGAAATGGGCTTTGTGCGGTGGGATTCATGGACGATCATTACCCTGTTCGAAGTGCCTTTTCTCT
TCTCAATCAGGTGATAGATGAGTACCAGAAGAGTTTTGGTGAGACATGGAGGTCTGCTAAAGAAGACTCCTCTCAGCCTTGGCCTT
ACTTAGCCGAAGCTCTTACCAAGTTTCAGGACCCAGCAGAGGCTGATAAGCTGTTGAAAATCCAGAGGGAGTTAGATGAGACCAAG
ATTATCCTTCATAAGACCATTGATAGCGTTCTAGCCCGTGGTGAGAAGCTGGACAGCCTAGTCGAGAAAAGCTCTGATTTGAGCAT
GGCATCCCAGATGTTCTACAAGCAAGCAAAGAAAACGAATTCATGCTGCACTATTCTGTGAGCTGCAACTCTCTCTCTCTCTGGAT
GTCTTGGGTATATATATATAGTCAACCAAACTTTTGCTGGGGGCAGAGGCGAGACTACAGTTTATCATTTTATATAAATTTGAATC
CCTTCTCGTTTGCATGCACTTTGAAAATTCCATAAGACTCATGTCGTGTGGCGTGTTATCCAAATACAGTTTCTATCGTCTCTACT
CTCTACCAAGATTATATGATTGCTTTTGTTTATGTTTTCTAATGGTAACAACATTATCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864547 hypothetical protein ARALYDRAFT_495912 [Arabidopsis lyrata subsp. lyrata] | 997 | 6e-106 |
| NP_200614 VAMP-like protein YKT61 [Arabidopsis thaliana] | 987 | 9e-105 |
| XP_002309328 predicted protein [Populus trichocarpa] | 935 | 9e-099 |
| XP_002324554 predicted protein [Populus trichocarpa] | 932 | 2e-098 |
| XP_002523504 snare protein ykt6, putative [Ricinus communis] | 928 | 6e-098 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZRD6 VAMP-like protein YKT61 | 987 | 4e-106 |
| Q9LVM9 VAMP-like protein YKT62 | 825 | 2e-087 |
| Q757A4 Synaptobrevin homolog YKT6 | 487 | 4e-048 |
| Q6FW27 Synaptobrevin homolog YKT6 | 474 | 1e-046 |
| Q6C537 Synaptobrevin homolog YKT6 | 473 | 2e-046 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HAR1 Predicted protein | 935 | 6e-099 |
| A9PAX2 Predicted protein | 932 | 1e-098 |
| B9SBY5 Snare protein ykt6, putative | 928 | 4e-098 |
| C6SYY8 Putative uncharacterized protein | 928 | 4e-098 |
| C6SVB1 Putative uncharacterized protein | 927 | 5e-098 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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