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Information for unigene UN47712

FASTA Sequence
Unigene ID: UN47712Length: 1678 SSR 
GGAAACCCATTTTGCATTACTCAAACCCTAATCTCCGAAGCTTCAATCGGATTTAATTTAGATATTATTAACTGTCGATGATCTGA
GCTTATCGACTCTCTAACAAACCCTAATTTTTTTAATCATCATGGCCTCCTCCGCCACTTCCAATAACAACCCTAACTCTTCTTCT
CGTCACACTACCGAGAATCGTGGCAGCCCCACCGCCGCGCAATCGCGCCGTCCTTCTCGCCATGTTTCCTCCTCTCCCTGGACTCA
AATCGTCCGCGGCGATTCAGACCCGCCCACGATCGTCTCCGTAGCTCCTTCCTCCCCTCAATCCAAGCCCCGGATCGATCCGATCG
CTGCTTCTTCTTCTTCTTCTTCTTCTACTGAGGTCGGACCTGTCATGGGAGCTTCCTCGTGGCCTGCTCTTTCCGAGACTACCAAC
AACAACAACAAGTCTTCCTCTGACTCCCTCAAAAGCCTCGGCGTCGGCAGTTCGCCACCTCCTGTCCCCGTTTCTCAGGGAATTGC
TAATGCTTCTGTTCCTTCTGCGCCAAAGCAACCCGGCCGTTCAAACCCTAATCCAACACTAAACCACTCCCGCCAGAGATCATTTA
AACGGAATGGCGCTTCTTCTGGATCCCCTGCTAATGGTACTGCTCCTCAACCATCAGCACAAGGTTCACTTGCTGAGTCGCACAAC
CCTTCTCCCAGAGGCCAGAACCAGAGGAACGGCTTTCCATCACAGACCCATGGCGGCGGTGGGACTGACAACGTAACTCAACGAGA
CTCGTACAGGAACCAAAACGGTAACCATCACCAAAGTCACGGCGGCAGGCGCAATCAGGAGCACGGGAATCAAAATTGGACTTTCA
GCAGGAGCTTTAACGGGAGAGATGGGAATGCACAGTCACAAAGAGGTGCTCCAGCTTTTGTAAGACATCCACCTTCACCTGTGCAG
CCAATTCCTCCTCAGTATATGGCAGCTCAGCCTTTTGCCAGCCCTCTGCCTTTCCCTCCTGAATTGGCATCGCAATATTATCAGCG
TATGCCTTTCGTTGCTCCTCTCTCACCTGCACCAGTCTTCTACCATGTCCAGGATCCTCCTTTGAACATAAAACTTCAGGAGCAAA
TACATTATTATTTTAGTGAAGAGAATTTGATTAAAGACATGTATCTTCGTCGGCAGATAGATGATCAGGGTTTTGTTCCACTGCCT
GTGATTGCTGTTTTCAATAAGGTTGCAGAACTCACAGATAGTGTCCAGCAGATAGCGGATGCTCTACAAGGTTCACCTGTTGTTGA
AGTTCAGGGTGACAGAATAAGGAAGCGCTTTAATTGGCAGCATTGGTTGATTCCTCAAGAACCGAACCCTGCGGTTTTGAGCCCCC
AATCTGTTGGCGCAGTAGCAAGCCGAGTTGGAAACTTGGCTATTGGTGAGAGCTCGGCAGGTCCAAATGGTGGGTCAAGCAGTCAT
CACCTGCAACCTGCGGGAGCAGAAAACGAAGCTGTTTCAGATGGTCAGCAACAGTCTCCTGGTGGTGTTCCAGTGAGCAACCGCAA
TGACTCGGATGGTGCTAACCGTTGAAACCATCATGTTTGGAGCTGGTGGTTAGTGCTGGACATGAAATATTTATTATTTCGTCTCT
GCCTAAAATCAGGGGAAAAAAAAACAATAATGAAGGGGGAATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869052 La domain-containing protein [Arabidopsis lyrata subsp. lyrata]13842e-150
NP_567991 winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana]13294e-144
CAA18483 putative protein [Arabidopsis thaliana]8322e-086
XP_002327642 predicted protein [Populus trichocarpa]6663e-067
NP_201411 winged-helix DNA-binding transcription factor family protein [Arabidopsis thaliana]4933e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q659C4 La-related protein 1B1939e-014
Q6PKG0 La-related protein 11812e-012
Q6ZQ58 La-related protein 11794e-012
Q75JC9 Uncharacterized protein DDB_G02716701606e-010

TrEMBL top hits (Blast detail)Scoree value
Q94K80 Putative uncharacterized protein AT4g3589013293e-144
O65626 Putative uncharacterized protein AT4g358908321e-086
B9MXC3 Predicted protein6662e-067
Q8RWR2 AT5g66100/K2A18_184932e-047
C5WXT7 Putative uncharacterized protein Sb01g0466604224e-039

Arabidopsis top hits (Blast detail)Scoree value
AT4G35890.1 La domain-containing protein13452e-148
AT5G66100.1 La domain-containing protein5262e-053
AT5G21160.1 La domain-containing protein / proline-rich family protein2206e-018
AT5G46250.1 RNA recognition motif (RRM)-containing protein1221e-006
AT5G46250.2 RNA recognition motif (RRM)-containing protein1221e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  67%
 
91  33%

Unigene MembersMember information