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Information for unigene UN47752
| FASTA Sequence |
| Unigene ID: UN47752 | Length: 883 |
SSR | | GGAATCAACTCTAAGGGCGGGAAAGACGGCGAACTAGAGAGAGAGAGAGAGAGAGAGAGGGAGAAAAGATGGATTCGGAGAAATCG
GTGGTGGACGAGCTGCCGCTAGCTATCGTGCGGCGGGTGGTGAAAGAGAAGCTTTCGGAGTGTTCGCCGGATTATGACGTGAGCAT
TCACAAGGAAGCGCTGCTTGCTTTCTCCGAGAGTGCCCGGATCTTCATCCACTACCTCTCCGCCACTGCAAATGATGTATGTAAAG
ATTCAAGAAGACAGACGATGAAAGCTGAGGATGTGTTTAAGGCATTAGAAGACATGGAATTTTCAGAATTTTTGGAGCCGCTTAAA
GCTTCTCTTGAAGATTTTAAGAAGAAGAACGCTGGGAAAAAGGCTGCTGGTGGTGGTGGTGGTGGAGCAGCAGGAGCAGCTTCGAA
GCCCAAAGAGACGAAAAAGATGAAACATGAAGAAGAAGCATCAACGCAGAAGGGCGTGACAAAAAGCAAAAGAGATGAGGGAGATT
TGGAGAAGAATGTTGAGGATGAGAACACGAAAGACAATGAGGATGATAATACCGAAGAGAATGGGAATGATGATGATGAGGAGGAG
GATGCTGCTGACGGGAATGAGGAAAACAGCATGGAAGAGAATGGGAATGAGGACAATAGCATGGAAGAAGAAGCTGGGAGTGGGAG
TGGTGAAGATGATGAGAACGGAGGTACTGGCGAAGAGGAGGATGAGTGAACTGAATTGGAGAGGCCTTTTCATATTCTTTTCTGCA
AAAAGATGTTTTCAGGCTAATGTTCTCTCATTATAGTGCTAAAAATCGATTAGCTTGTTAAGCTTGAGTAGCACTGTTGTAGTTGT
TGGCATGTCCATGTCGTAGACTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880919 hypothetical protein ARALYDRAFT_481647 [Arabidopsis lyrata subsp. lyrata] | 734 | 2e-075 |
| NP_180316 nuclear factor Y, subunit B11 [Arabidopsis thaliana] | 697 | 3e-071 |
| XP_002275482 PREDICTED: hypothetical protein [Vitis vinifera] | 423 | 2e-039 |
| ACU14526 unknown [Glycine max] | 402 | 5e-037 |
| XP_002312821 predicted protein [Populus trichocarpa] | 391 | 9e-036 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JQ9 DNA polymerase epsilon subunit 3 | 163 | 1e-010 |
| P87174 DNA polymerase epsilon subunit D | 160 | 2e-010 |
| Q7M732 Retrotransposon-like protein 1 | 157 | 6e-010 |
| O23310 Nuclear transcription factor Y subunit B-3 | 156 | 7e-010 |
| P13816 Glutamic acid-rich protein | 144 | 2e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9ZQH2 Putative CCAAT-binding transcription factor subunit | 697 | 2e-071 |
| C6SZ53 Putative uncharacterized protein | 402 | 3e-037 |
| A9PCR2 Predicted protein | 391 | 6e-036 |
| B9SCU4 DNA polymerase epsilon P17 subunit, putative | 370 | 2e-033 |
| D5ACV8 Putative uncharacterized protein | 334 | 3e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27470.1 NF-YB11 (NUCLEAR FACTOR Y, SUBUNIT B11); transcription factor | 697 | 1e-073 |
| AT4G14540.1 NF-YB3 (NUCLEAR FACTOR Y, SUBUNIT B3); transcription factor | 156 | 7e-011 |
| AT2G38880.2 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | 138 | 8e-009 |
| AT2G38880.3 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | 138 | 8e-009 |
| AT2G38880.1 NF-YB1 (NUCLEAR FACTOR Y, SUBUNIT B1); transcription factor | 138 | 8e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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