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Information for unigene UN47756

FASTA Sequence
Unigene ID: UN47756Length: 822 SSR 
GGCTCTCCGCCGTCTCTACACTCTCTCACTCTCACTTATCATCATCACACACACTCTCTGCTTCACAAGAAGAGCTTTCTGATTCG
TCTCTGTTGTTTCTGCTTCTGGTTGATACTTTCAGCTTAAGCTCCAAGTCGATCAATATGTCAATGACGGAAGAGAGTAAGACGAC
GAAGCTCGAATCGGCGGGAGACTCCTCGGATGTGGAGAACGGGAACTGTAGCAGTAGCGGAAGTGGAGGAGGAGGAGGAGGAGGAG
GCGATACTAAGAAGACGTGCGTTGATTGCGGAACTAACAAGACTCCTCTCTGGCGTGGTGGCCCTGCTGGTCCTAAATCATTGTGC
AATGCGTGTGGGATCAAGAGCAGGAAGAAGAGACAAGCAGCTCTTGGGATTAAACAAGAGGATAATAAGATGAAAAACAACAAAAG
TAACGATAGCTGTCTCGCTCCCGACAATCAGACCGTCAAAAACGGAAAAGGCGATTCAGGAAGCGTCAAGAACAAGATCAAGAAGA
CGGAGAGTGAGGATTGTAATGACAAGAAGAGTGTGAAAAGGGGTGGTAGATTTTTGGATTTGGGATTTAAAGTGCCGGTGATGAAG
AGATCGGTGGTGGAGAAGAAGAGGGTATGGATGAAGCTGGGTGAAGAGGAACGAGCAGCAGTGCTTCTCATGGCTCTTTCTTGTGG
TTGAGCTTTTTTTTGTCTCAACTCCTTTTTTTTGGTCGGAATGGTTTAGAGAAGAGATTAGGGCAAATAAAGAAATGATGAATTTT
TATGTGTAATCCTGTCTGAAGGTTAAAGCTAATGTTATGCTACTTACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868160 hypothetical protein ARALYDRAFT_329901 [Arabidopsis lyrata subsp. lyrata]6695e-068
NP_188312 GATA transcription factor 17 [Arabidopsis thaliana]5441e-053
NP_680707 GATA type zinc finger transcription factor family protein [Arabidopsis thaliana]4232e-039
XP_002885174 hypothetical protein ARALYDRAFT_479155 [Arabidopsis lyrata subsp. lyrata]3837e-035
ACU17164 unknown [Glycine max]2465e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q9LIB5 GATA transcription factor 175447e-055
Q8LG10 GATA transcription factor 152132e-016
Q9FJ10 GATA transcription factor 162122e-016
Q8LC79 GATA transcription factor 182032e-015
Q9SZI6 Putative GATA transcription factor 221772e-012

TrEMBL top hits (Blast detail)Scoree value
Q0WPA1 Putative uncharacterized protein At3g168705441e-053
Q8GW81 Putative uncharacterized protein At4g161414231e-039
C6T5X2 Putative uncharacterized protein2464e-019
B9N4N6 Predicted protein2293e-017
B9RZK8 GATA transcription factor, putative2251e-016

Arabidopsis top hits (Blast detail)Scoree value
AT3G16870.1 zinc finger (GATA type) family protein5446e-056
AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding4263e-042
AT3G06740.1 zinc finger (GATA type) family protein2131e-017
AT5G49300.1 zinc finger (GATA type) family protein2122e-017
AT3G50870.1 MNP (MONOPOLE); transcription factor2032e-016

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
101  50%

Unigene MembersMember information