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Information for unigene UN47797

FASTA Sequence
Unigene ID: UN47797Length: 1096 SSR 
CGGATAAGAGAAGAAAATTAAGATTACTGTTTATATCATAACCTCATGTTCGTTTTACTCTAATTGGTTCAAGATGCTGTCTATCT
TGGCAAATGAAAAGGCACACATTAACAAGAAAGTAGCTATACAGTCTCTCATACGATCAGTCACCTGGTTCTAGACGAGGCTTGAC
CTTTTTTAATAAATCTCATCATCAGGTATCTCTGGTGTCAAGAACTTCATCGGATCTTTACTAATCTCCTCATAGTTTACCCTCGG
TTTCACCCTATCAGGCACAGGCTCAAGAGGAATGATGCTGTCTCCATCAATAACCCCATCAATCAAACCATACTCAACCGCTTCAA
TGGGAGACATGTACCGGTCCCTGTCAATATCTTTCAAAACCTGCTCAAAGACCGGCTAGTACACCCGGCGATAATGCTGGTGACAT
TGTTCTTGTTATGCATAACTTCTTTAGCTTGGATCTCAACATCTATAGCTTGACCACTCGCACCTCCAAGAGGCTGATGCATCATT
ATCCTCGTGTTGGGCATAGCAAAGCGCTTGCCTTTAGTTCCGGCACCGAGAATTATCGAAGCCGTTGATGCAGCAATGCCGAGAGC
AATCGTGGAGACATCAGCTCGGATAAGCTGAACCACATCGTATATAGCCATGGTTGCACTGAGGGAACCACCAGAGGAGTTGATGA
AGAGTTTGATGTCTTTGTTAGGGTCTTTAGCATCAAGGAGCAGGAGCTGACTCATGATTGCGTCGGCGACGAAATCGTCGATACTG
CTGCCGAGGAAGACGATTCGTTCCCTAAGGAGAAGACCCATGACGTCAGACTCCGCGCCGCGAATGGCTGACTCGTGTGTCTGCGA
CATCTCGATTGAAGCGTTCGCGAATCTCAGTGGCGACGGAGAAGTTCTTAAGGGGGTTGAAATGGGTTTGAGGTGGAGTTTGTTGG
GTTTCGGGAAGGAAGAAGAAGAAGAAGAAGAGGTGGAGGGAGATGAGCTGGGTCTTGGTGAAACGAGGGAAGGTTTGAGGGAAGAT
GAGAGAGATAGGGTTCCCATGGCTGAAGCGGAGAAGGAAGTGTTTTGAGTGTGAGAGATTGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAA82068 nClpP4 [Arabidopsis thaliana]9691e-102
NP_568644 ATP-dependent Clp protease proteolytic subunit 4 [Arabidopsis thaliana]9539e-101
AAM65254 ATP-dependent Clp protease proteolytic subunit (ClpP4) [Arabidopsis thaliana]9493e-100
CAA04393 ClpP [Arabidopsis thaliana]7361e-075
XP_002890941 hypothetical protein ARALYDRAFT_890716 [Arabidopsis lyrata subsp. lyrata]7306e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q94B60 ATP-dependent Clp protease proteolytic subunit 4, chloroplastic9534e-102
O34125 ATP-dependent Clp protease proteolytic subunit 24321e-041
Q5N1P6 ATP-dependent Clp protease proteolytic subunit 34321e-041
Q3ANI8 ATP-dependent Clp protease proteolytic subunit 14311e-041
Q8YQX8 ATP-dependent Clp protease proteolytic subunit 24311e-041

TrEMBL top hits (Blast detail)Scoree value
B9S1L6 ATP-dependent Clp protease proteolytic subunit6776e-069
A9PA38 ATP-dependent Clp protease proteolytic subunit6732e-068
B9GZW8 ATP-dependent Clp protease proteolytic subunit6321e-063
Q7XBR2 ATP-dependent Clp protease proteolytic subunit6005e-060
Q9FRM4 ATP-dependent Clp protease proteolytic subunit6005e-060

Arabidopsis top hits (Blast detail)Scoree value
AT5G45390.1 CLPP4 (CLP PROTEASE P4); serine-type endopeptidase9533e-103
AT1G66670.1 CLPP3; serine-type endopeptidase4005e-039
AT1G02560.1 CLPP5 (NUCLEAR ENCODED CLP PROTEASE 5); serine-type endopeptidase3871e-037
AT5G23140.1 NCLPP7 (NUCLEAR-ENCODED CLP PROTEASE P7); serine-type endopeptidase3217e-030
AT1G11750.1 CLPP6; serine-type endopeptidase2974e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
72  67%

Unigene MembersMember information