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Information for unigene UN47804

FASTA Sequence
Unigene ID: UN47804Length: 1443 SSR 
GACATAGTTGAACAAGTCAACATATTCTCGCATCTTTTGAGGGACAGGAAGACAGGGAGAGGTGGTTGTGTTCGAATCTTCCCCAA
AACTGGTGACATCTGGGCTGTATACAAGAACTGGTCGCTAAACTGGAATGAATCAACACCTGACGAAGTGAGGCACGAGTACGAAA
TGGTCGAGATCCTTGATGAGTATACTGAACAGTATGGTGTGTGCATTGCGCCTCTTGTTAAGCTAGAGGGTTACAAAACAGTGTAT
CACAGGAGCGGGAGGGAAGAAGACGGTAAGAAATGGATACCCAGGAGCGAGATGCTGCGGTTTTCACATCAAGTGCCGTCTTGGTT
TCTCAAAGGTGCAACTAGCGGCTTTCCCGGAAACTGTTGGGACTTGGATCCGGCTGCAATCCCCGAGGAGCTGCTTCAAGTCGGAG
CAGAAGCCTGATTGATGATTCCAGTGACGTACCCTGCAGGAGAAGCAAGGTTTCAGATTTAGACCAAGTGTTATAGTTGTACCAGC
GAAGACTAGAGATGTAAGAGAGAGAGAGACTGTTGACACGCAAAAGATTCTGTTTGGTCACTAAAGCTGTTGTATTAGGTGATGTC
CAACTGAGTAAACCAAAGCGTAGTTGTTTTTTTGTTTGCTAAAAAAAAAAAAAAAAAAAAAAAACTCATATTGTTCATTTCAATGG
CAAATTTCAAGTTTCCTCTGCTTATACTGTTCGTTCTATATTTTTCCCAGCTTCATCTACTTCAGTTTCACCATGACTTCTTCTCT
TCTTTTCCGGTCAAGATCGGTCTACTCATCATATCCATCCTCCTCTATGCTTACTCAAGCACACGGTCTAAACCAGTTTACCTTGT
CGACTTCTCATGTCACCAACACCGACTCATGCAAAATCTCATCCGAAACGTTCTTCAACATGGCCAAAGGTGCTAAACTCTACACC
GAAGAAACAATCCAATTCATGACGAGGATACTAAACCGGTCCGGTTTAGGAGATGATACGTACGCCCCACGTTGCATGTTGACCTC
TCCACCAACGCCATCAATGTTTGAGGCCAGACATGAAGCCGAATTAGTCATATTCGGAGCTCTTAACTCGCTATTCAAGAAAACAT
GAGTTGAACCGAGAGAAGTTGGAATCTTCATTGTAAATTGCAGCTTGTTTAACCCTAACCCATCTCTCTCTTCCATGATCGCAAAC
CGGTACAAGCTCAAAACCGACGTGAAAACATACAATCTCTCCGGTATGGGATGCAGCGCCGGCGCAATCTCGGTAGATCTCGCCAC
GCATCTTCTTAAAGCAAACCCTAATACCTATGCAGTCATTGTTAGCACGGAGAACATGACTCTTAGCATGTATCGAGGCAACGACC
GGTCCATGCTGGTCCCTAACTGTCTATTTCGAGTAGAGTGCGGGGTTTGCTCTCAAACGGAGCCAGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAZ68133 3-ketoacyl-coA synthase 13 KCS13 [Arabidopsis halleri subsp. halleri]8795e-092
XP_002880261 hypothetical protein ARALYDRAFT_346483 [Arabidopsis lyrata subsp. lyrata]8795e-092
NP_182195 3-ketoacyl-CoA synthase 13 [Arabidopsis thaliana]8761e-091
AAG24644 putative 3-keto-acyl-CoA synthase [Arabidopsis thaliana]6806e-069
NP_187639 3-ketoacyl-CoA synthase 14 [Arabidopsis thaliana]6108e-061

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUZ0 3-ketoacyl-CoA synthase 138765e-093
Q9SS39 Probable 3-ketoacyl-CoA synthase 148237e-087
Q9MAM3 3-ketoacyl-CoA synthase 15843e-059
O48780 3-ketoacyl-CoA synthase 115306e-053
Q5XEP9 3-ketoacyl-CoA synthase 175298e-053

TrEMBL top hits (Blast detail)Scoree value
D4HU18 3-ketoacyl-coA synthase 13 KCS138793e-092
B9GRP8 Predicted protein5872e-058
Q0WVC3 Putative fatty acid elongase 3-ketoacyl-CoA synthase 15845e-058
Q6DUV5 Fatty acid elongase 3-ketoacyl-CoA synthase5802e-057
Q6DUV6 Fatty acid elongase 3-ketoacyl-CoA synthase5774e-057

Arabidopsis top hits (Blast detail)Scoree value
AT2G46720.1 KCS13 (3-KETOACYL-COA SYNTHASE 13); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups8764e-094
AT2G05250.1 DNAJ heat shock N-terminal domain-containing protein6812e-071
AT2G05230.1 DNAJ heat shock N-terminal domain-containing protein6812e-071
AT5G35753.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT2G05250.1); Has 372 Blast hits to 224 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 372; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).6239e-065
AT3G10280.1 KCS14 (3-KETOACYL-COA SYNTHASE 14); acyltransferase/ catalytic/ transferase, transferring acyl groups other than amino-acyl groups6103e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  50%
 
121  50%

Unigene MembersMember information