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Information for unigene UN47820
| FASTA Sequence |
| Unigene ID: UN47820 | Length: 527 |
SSR | | TTTTTTAGCAGAACCAAAGCTTTTTCATCTTATTATCCATCTTCTATCTTTGGTTAAGAAGAGAAGGTAAATCAAAAAGCTGGTAA
CTTTTGGTACATGATAGGAGGCTTTGAAGGAGATAAACAGATCAAGCTGTTCTCTTTATGATATGGACTCCACTGTCTGTGTCCAC
AATCTCGCTTATATCTCCCACCTTCAGTGCGTATGTTGCTTCCTCAAACGGTTTCTGCATTTGACCTCGCCCAAATGGACCTAGAT
CGCCGCCGCGTTTAGCAGAGCTACAGTCGGAAACACGAGTGGCCACATCCTCGAAGTTGGCTTTGCCAGAGAGGATGTCTTCACGG
ATCGATTTAGGCTGTTCGACGGCTGCTTGCTTTGGTGGTGGTGGTGGTGGTGGTGATCGGCTCTCTTGTCCTTTGGTTGATCTGTC
GAAGAGACAGAGTCTTTCTTCCGTTTCCGATCTGAATCTATCTTCGAAGATTTGGGGATTGAGAGAGATGTCTCTGACGACGAAAA
CGGAGAAAGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34365 unnamed protein product [Thellungiella halophila] | 392 | 2e-036 |
| XP_002884105 PIN1AT [Arabidopsis lyrata subsp. lyrata] | 388 | 6e-036 |
| 1J6Y Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana | 380 | 5e-035 |
| NP_179395 Peptidyl-prolyl cis-trans isomerase Pin1 [Arabidopsis thaliana] | 380 | 5e-035 |
| CAM59671 parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus] | 366 | 2e-033 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SL42 Peptidyl-prolyl cis-trans isomerase Pin1 | 380 | 3e-036 |
| Q94G00 Peptidyl-prolyl cis-trans isomerase Pin1 | 334 | 6e-031 |
| Q9LEK8 Peptidyl-prolyl cis-trans isomerase Pin1 | 311 | 3e-028 |
| P0C1J8 Peptidyl-prolyl cis-trans isomerase pin1 | 233 | 3e-019 |
| Q9QUR7 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 | 232 | 4e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A7DX09 Parvulin-type peptidyl-prolyl cis/trans isomerase | 366 | 2e-033 |
| B9SXN0 50S ribosomal protein L20, putative | 343 | 7e-031 |
| C6SXD9 Putative uncharacterized protein | 341 | 1e-030 |
| B9HFK6 Predicted protein | 338 | 3e-030 |
| A9NWJ4 Putative uncharacterized protein | 318 | 6e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G18040.1 PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl cis-trans isomerase | 381 | 2e-037 |
| AT1G26550.1 peptidyl-prolyl cis-trans isomerase PPIC-type family protein | 121 | 3e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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