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Information for unigene UN47848
| FASTA Sequence |
| Unigene ID: UN47848 | Length: 703 |
| SNP | AAACATATGTACAAGGATAGTATCAAATATTTTAGGATAAGTCGCTGAGAATACAAGAGCAAAAAGGAATCAAAACCGTCAAAACA
AAAAACAAAAACAAAAAAAGAAAAAGAAAGAGAAGAAAGTCTATCCACTATTGGTTTCAAAACGCAACTCATTCGATTACAACTAA
TCTCGAAAACCACAATCAGTTCATTGCGATCTTGATTTTAGACGGCAGCAGCGATCCTTCCCGCGACTTGGTCAAGATCTCTCTGA
CCACTCGATGTGATCTTCCTCCCCCCTTTGGTGTCAAGGTCGACAATGCTCATGGTCTGAAGCTGCTGAAGAATGTGACGAGCAAC
ACCACCACTGCTCTTACAGAAATGAGGAGGACGGCTTCCGTTCCTCTTGCTTCCTCCATAGATCCTACGGAAGCCACCCACTCCAA
GTCCACCTCTCAAGTACACTTTCCTCGCCATCGATGCGGCTCTGATGTAGTACCAGTCAGGGTCATAAGGAGCAAGCTCCTTGAGT
TTACCAGTCTTCACTATGTCTGTCCACGGTGGCAGCTCAATCTTGCCGGAGCGTTTGAGATGGGCAGCGTAAGCCTTGACGAACTC
GTGTGGAGACATATCCTTCACTGTTTTGCCTGTCGCCATTTTGTTCTCTCGCCCTCCGATCTTCTGCTGCGGAACTAGGGTTTTTT
CAGGAGTTTCTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_200925 40S ribosomal protein S19-3 [Arabidopsis thaliana] | 725 | 1e-074 |
| NP_197056 40S ribosomal protein S19-2 [Arabidopsis thaliana] | 699 | 1e-071 |
| NP_186857 40S ribosomal protein S19-1 [Arabidopsis thaliana] | 698 | 1e-071 |
| XP_002884301 40S ribosomal protein S19 [Arabidopsis lyrata subsp. lyrata] | 684 | 6e-070 |
| XP_002305397 predicted protein [Populus trichocarpa] | 674 | 9e-069 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNP8 40S ribosomal protein S19-3 | 725 | 5e-076 |
| Q9LF30 40S ribosomal protein S19-2 | 699 | 5e-073 |
| Q9SGA6 40S ribosomal protein S19-1 | 698 | 7e-073 |
| P40978 40S ribosomal protein S19 | 583 | 2e-059 |
| Q94613 40S ribosomal protein S19 | 451 | 3e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q67ZX8 40S ribosomal protein S19-like | 725 | 8e-075 |
| Q0WSH0 40S ribosomal protein S19-like | 699 | 8e-072 |
| B9H0J0 Predicted protein | 674 | 6e-069 |
| B9SJC6 40S ribosomal protein S19-3, putative | 673 | 8e-069 |
| B9SJC5 40S ribosomal protein S19, putative | 670 | 2e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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