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Information for unigene UN47873

FASTA Sequence
Unigene ID: UN47873Length: 1272 SSR 
CCTCCACTGTCCTGATTTATGTGCATTTCTCTCTTGTTAACAGAGTGACAAGATCATCAAGTAGTAATCTTGAAGTAAACAAAGAT
TTTTGAGATAACCTTTTATTAAGTGTTTGTCTGATGATGAAGAGATTAAGGAGTTCAGATCCAGTGGGTGGTCTGATCTCTTTATG
TCCTACGTCTTCTACAGATGAGCAGAGTCCAAGAAGATACGGGAGAGAATTTCAGTCGATGCTTGAAGGTTACGAGGAGGAGGATG
AAGAAGCGATAATTGAGGAAAGAGACCAAACCGGTTTAGCTGAGAAAAAAAGACGGTTAAGCATTAACCAAGTCAAAGCCTTGGAG
AAGAACTTCGAGTTAGAGAACAAGCTTGAGCCTGAGAGGAAAGTGAAGTTAGCTCAAGAACTTGGTCTTCAACCTCGTCAAGTGGC
TGTTTGGTTCCAGAACCGCCGTGCACGGTGGAAGACAAAACAGCTGGAGAAAGATTACGGTGTTCTTAAAACTCAGTACGATTCTC
TCCGCCATAACTTCGATTCCCTCCGCCGTGACAATGAATCTCTTCTTCAAGAGATTAGTAAACTGAAGTCTAAGCTTAACGGAGAA
GAAGAAGAAGAGGAGGAGGAGGAGGAAGAGAACAACGCCGTGAAGGAGGAAGAAGTTTCGTTGCCGGAAAATATAACAGAACCGCC
GTCGTCTCCTCCGCAGCTTCTAGAACATTCGGATAGTTTCAATTACCGGAGTTTTACCGATCTCCGGGAACTTCTTCCACTAAAGG
CTTCCTTCGCCGCCGCCGCTGGATCGTCGGACAGCAGCGATTCGAGCGCCGTGATGAACGAGGAAAGCAGCTCTAACGTCACGGTG
GCTCCGACGACGGTTCCGGGCGGTGGTTTCTTCCAGTTTGTGAAAACGGAGCAGACGGAGGATCACGACGACTTTCTGAGTGGAGA
AGAAGCTTGCGGTTTTTTCTCCGATGAGCAACCGCCGTCTCTGCACTGGTACTCCGCCGTTGATCACTGGGCTTGAAGCTTTAAAC
GCCGGAAGAGGTTTTTGGATTGGATTAAATTGTTCTCTTTTTTTCTATGTGGGTTCGGAGGAGAAGATGGAAAAAGGAGGGGGCAC
AGTGGGAATAACGAGAAAGTGGAAGGGTGAATGGGAAAATAAGGAAGGTTAGGTCTGGGCGGGAAATAATTGATTAGGGTGAATTT
GTGATTATGTTTTCTCTGCCGTTTCGTGCACTTCTTGTAATTAAGGATTATGAGGATTGAGAAAGGGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAF73482 hb-6-like protein [Brassica rapa subsp. pekinensis]13222e-143
NP_565536 homeobox-leucine zipper protein ATHB-6 [Arabidopsis thaliana]13151e-142
XP_002880443 hypothetical protein ARALYDRAFT_481105 [Arabidopsis lyrata subsp. lyrata]13142e-142
AAD41726 homeobox protein ATHB6 [Arabidopsis thaliana]12049e-130
BAJ33818 unnamed protein product [Thellungiella halophila]10587e-113

Swiss-Prot top hits (Blast detail)Scoree value
P46668 Homeobox-leucine zipper protein ATHB-613155e-144
Q940J1 Homeobox-leucine zipper protein ATHB-1610144e-109
P46667 Homeobox-leucine zipper protein ATHB-55682e-057
A2YWC0 Homeobox-leucine zipper protein HOX204231e-040
Q6Z248 Homeobox-leucine zipper protein HOX204231e-040

TrEMBL top hits (Blast detail)Scoree value
Q9M4Q1 Hb-6-like protein13221e-143
Q69G85 Homeodomain-leucine zipper protein8301e-086
A9PHT9 Putative uncharacterized protein6096e-061
B7FJW8 Putative uncharacterized protein5576e-055
Q2V2V1 Putative uncharacterized protein At5g65310.25532e-054

Arabidopsis top hits (Blast detail)Scoree value
AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor13154e-145
AT4G40060.1 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor10153e-110
AT5G65310.1 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor5682e-058
AT5G65310.2 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor5531e-056
AT3G01470.1 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor3674e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
211  50%
 
181  50%

Unigene MembersMember information