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Information for unigene UN47900

FASTA Sequence
Unigene ID: UN47900Length: 1135 SSR 
GGATCGTGGGGTTCAAAATCATTGGAGAGAGAGAGAGAGAGAGAGAGAGAGGAAGATGAGGTTTTGCTCAATTTCTCCGCCTGTGT
GTGTTCTCGTCGATTGCTCTTGCGCCACCCAGTTCCAATCTCAGTCATGGTCTTCTCCGAATTTGCGCCACTGCTGACGACGGAGT
GGAAGCTCCCGAGGAGGTTCAAACCGAATCTCCTTCCTCTTCTTCTTCCTTTTCTTCTGCACTCGGTAAAGACTTGAAAAAGGTGG
TTAACAAGACAGCAGCAACCTTTGCGCCTAGGGCCTCCACCGCCAGTAAAAACCCAGCTCTCCCTGGAACTACTCTTTACAAAGTT
TTTGAGGTTCAAGGTTATGCATCCATGTTCCTTGGAGGTGTTCTCTCTTTCAACCTCCTCTTTCCCTCCACCCAACCTGACTTATG
GAGGTTGATGGGTATGTGGTCCATTTGGATGTTCACTATTCCTTCTCTTCGAGCACGTGACTGCCCTCCTAAAGAGAAAGAAGCTC
TTAGCTATCTTTTTCTCATCATCCCTTTACTCAATGTTGCTATTCCCTTCTTCTGGAAATCTTTTCCTCTTGTCTGGTCTGCTGAT
ACCCTTGCCTTCTTTGCCATGTATGCCTGGAAGCTTGGATGGCTGGAAAGAACCGAGTAGGGCTACTCCTGTTGGGATTAGAGTCT
GGAAGATTCTATGTCTTCTCTTCCTTAGAATGAATGATTCTCCATCCAAGCTTCTCTCTTACCAAGTACAGCATATTTAATATTCG
AGGAAATGAAAATGCGACTTCATATACATTTTCTTATCAAGAGCGCAGCTGGTAAATTTACAGAAAGTAAACAAGTGTGCTCTCTT
TTTCTTTTCTGAATGAATAAAGAAGTGTGCTCATTGCATTTGCATTCCAGGGTGTATGTTGTTTCTTCTTCTATTGTACATAAAAA
TGCAAGATAGGAGAAGGGGATCGTTTGTTTGGTTATAGGCTAAGCTTTTTCGCATCTTCTCTATAAAAGCATCTGATTTCTTATTT
TTGTCCCGAGTGATTTGTTGCTTAGGCCTCGGCATGCTCTTCTTCCTCTTGTTATGTAACCTCTACTTTGGGGCCGCTACTAGTAC
CATTTATCCTTCTCTCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566122 resistance to phytophthora 1 protein [Arabidopsis thaliana]7745e-080
NP_001189776 resistance to phytophthora 1 protein [Arabidopsis thaliana]7593e-078
XP_002880341 predicted protein [Arabidopsis lyrata subsp. lyrata]7522e-077
XP_002320387 predicted protein [Populus trichocarpa]6733e-068
XP_002524796 conserved hypothetical protein [Ricinus communis]6455e-065

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ZU82 Expressed protein7744e-080
B9IA07 Predicted protein6732e-068
B9SFM7 Putative uncharacterized protein6453e-065
B8AYC0 Putative uncharacterized protein6249e-063
Q6AUK1 Os05g0404400 protein6249e-063

Arabidopsis top hits (Blast detail)Scoree value
AT2G48070.1 RPH1 (RESISTANCE TO PHYTOPHTHORA 1)7752e-082
AT2G48070.2 RPH1 (RESISTANCE TO PHYTOPHTHORA 1)7752e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  50%
 
111  50%

Unigene MembersMember information