 |
Information for unigene UN47914
| FASTA Sequence |
| Unigene ID: UN47914 | Length: 823 |
SSR | | GGATTATTAATCATCAATTAGCTCATTACAGAGAAATAACCAAACAGAGAGAAAAAAAAACACGGCAACTCAAGCGTCCGGACTCT
TTAGCTCCGCCATAACAACCACAGCAGCCTCCGGAGTGAAAAAACTTCACTTTTTCACAACAACCCACCGTCCAAGATCCCTCTCC
CTCACCAAAACCGCAAAGCCCAGGTGGAAGAGTTCTACGTTATTACATGGAACTCGCCGAAAGAACAGATCTTTGAGATGCCGACA
GGAGGTGCGGCGATCATGAGGGAAGGTCCGAACTTGCTGAAGCTGGCGAGGAAAGAACAGTGCTTGGCGTTGGGGACAAGGCTTAG
GTCCAAGTACAAGATTAACTACCAGTTTTACAGGGTGTTCCCGAATGGTGAGGTTCAGTATCTTCATCCTAAAGATGGAGTTTACC
CGGAGAAGGCGAATCCGGGAAGAGAAGGTGTTGGTCAGAATATGAGATCTATTGGGAAAAATGTCAGTCCCATTGAAGTTAAGTTT
ACTGGGAAACAAAGTTATGATTTGTAAGTTGTGAAAATTTAAAACAAAAAATCATGTGGATGTGACTATGTTTGGTTTTAATTTTT
AATGGGGTTCATCTGAATAATTATTCTCTTATTATATTTTGTTGTTGTTGTTGTTATATGAATTTTGTTGTGGTCATTCTCAGTCA
GTTAATTTATATGAAGCTCTTCCAACAACAACGATATTGAAGACGAGAGGTTTCAAAACTTATGTTGTATGTAAAAGGTGTTGTAT
CTTTGATGTCCGTAAGCTAAAGCTATATGGTAATGTTCCAATTTCCCCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192186 photosystem I reaction center subunit II-1 [Arabidopsis thaliana] | 617 | 5e-062 |
| NP_171812 photosystem I reaction center subunit II-2 [Arabidopsis thaliana] | 617 | 5e-062 |
| AAM66066 putative photosystem I reaction center subunit II precursor [Arabidopsis thaliana] | 617 | 5e-062 |
| XP_002872810 hypothetical protein ARALYDRAFT_490280 [Arabidopsis lyrata subsp. lyrata] | 617 | 5e-062 |
| XP_002892148 hypothetical protein ARALYDRAFT_887465 [Arabidopsis lyrata subsp. lyrata] | 617 | 5e-062 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7H1 Photosystem I reaction center subunit II-1, chloroplastic | 617 | 2e-063 |
| Q9SA56 Photosystem I reaction center subunit II-2, chloroplastic | 617 | 2e-063 |
| P32869 Photosystem I reaction center subunit II, chloroplastic | 603 | 1e-061 |
| P12353 Photosystem I reaction center subunit II, chloroplastic | 594 | 1e-060 |
| P12372 Photosystem I reaction center subunit II, chloroplastic | 590 | 3e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PGC7 Putative uncharacterized protein | 604 | 1e-060 |
| A8C172 PSI reaction center subunit II | 602 | 2e-060 |
| A9PIP5 Putative uncharacterized protein | 601 | 2e-060 |
| A9PJR8 Putative uncharacterized protein | 601 | 2e-060 |
| B9RSQ3 Photosystem I reaction center subunit II, chloroplast, putative | 601 | 2e-060 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
