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Information for unigene UN47975
| FASTA Sequence |
| Unigene ID: UN47975 | Length: 1486 |
SSR | | AAACAAATAACACTCCATATCATTTCAAAAATAAAAATGGTCACAACAGAGAGAGATTATGTTCGTAGAACAGTAGGTGAAAACAC
ACAAGAGAAACAAGCTGATGTAGAGAGAGAGAGAGAGATGATAGGGTATCAAAATCAGAACAAAGAGAGAGTGCCTTAGGAAAACA
AGTAAACCTTTCTTCTCCGGTGATAATACTTCTCCTTCACAGCAGATCAGCAACGTTCGAAGGCAGCTCCTCAACAACCACATTAT
AAAACTTCTGAATATCAAACAACATCCTCTCATCATCCTTGGTCACAAAGTTGATCGCCACACCTTTCCTCCCAAACCTCCCACTC
CTTCCGATACGGTGCAGGTAGTTCTCAGGCTGAGTCGGCAAATCGTAGTTGATCACCAGCGACACCTGCTGCACATCGATCCCACG
AGCCAACAGATCAGTCGTAATAAGCACACGCGAGGAGCCAGACCTGAACTCCCTCATGATAATGTCCCTCGTGTTCTGGTCCATGT
CTCCGTGAGTCGCAGAGACGGTATGGTCACGCCCCCTCATCTTGTCGGTGAGCCAGTCCACCTTCCTCCTCGTGTTCACGAAGATG
ACGCTCTGAGTGATGGCCAGCGTCTCGTAGAGATCACAAAGCGTCTCGAGCTTCCACTCCTCCTTCTCCACGTTCACGTAGAACTG
CTTGATACCTTCCAAGGTGAGCTCGTCGCGCTTCACAAGTATCCTCACCGGCTTGCTCATGAACTTCCTCGTGATCTCGAGAGCCT
CGGGAGGCATGGTCGCCGAGAAGACTCCGACCTGGATCTTGGGAGGGAGGAGCTGGAAGATGTCGTAGATCTGGTCCTTGAACCCG
CGGGAGAGCATCTCGTCGGCCTCGTCAAGAACGAACATCTTGATGTGGTCGGCGCGGAGGGACTGCCTCTTCAGCATGTCGAAGAC
GCGTCCAGGGGTGCCCACGACGACGTGGACACCCGCCTGGAGAATGCGCTGGTCCTCGCGGACGCTGGTCCCGCCGACGCAGGCGT
GGACCTTGACGCCGAGGTAGTCGCCGAGGGCTCTCATGACCTTCTCGATCTGCTGGGCGAGCTCTCGTGTCGGGGCGAGGACGAGG
GCCTGGCACTGGACGAGGGTGTAGTCTAGCTGCTGGAGGACGCCGGAGCAGAAAGTGGCGGTTTTGCCGGTACCGGACTGGGCCTG
CTGGATCACGTCGAGGCCTTTGCAGAAGGGTACGATTCCTCTTTGCTGAATAGCAGATGGCTTCTCAAAACCGTAAGCGTAGATAC
CCCTGAGGAGATTCTCTTGAAGACCCATGGCGTCGAAGCTGTCGTGAGACTCGTCATAAGAGGTGAAGAACTCGTCCTGTCCTTCG
AGAACATCGTTTAACTTCTGGTCGAACTGACGAGCATCAAACTGAGCCTTCTGGTGCGGATCCTGCCATGACTGGAGCGAAGAGTA
GAGTGATATTTTCTTTTTTTTGGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884997 predicted protein [Arabidopsis lyrata subsp. lyrata] | 2019 | 3e-224 |
| NP_566469 translational initiation factor 4A-1 [Arabidopsis thaliana] | 2018 | 4e-224 |
| AAL91176 eukaryotic translation initiation factor [Arabidopsis thaliana] | 2015 | 1e-223 |
| AAM63951 Eukaryotic initiation factor 4A, putative [Arabidopsis thaliana] | 2013 | 2e-223 |
| BAE98559 eukaryotic protein synthesis initiation factor 4A [Arabidopsis thaliana] | 2008 | 6e-223 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P41376 Eukaryotic initiation factor 4A-1 | 2018 | 2e-225 |
| P41377 Eukaryotic initiation factor 4A-2 | 1984 | 2e-221 |
| Q40467 Eukaryotic initiation factor 4A-14 | 1962 | 6e-219 |
| P41379 Eukaryotic initiation factor 4A-2 | 1960 | 1e-218 |
| P41382 Eukaryotic initiation factor 4A-10 | 1951 | 1e-217 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8MRZ7 Uncharacterized protein At3g13920.3 | 1949 | 3e-216 |
| B9S5V7 Dead box ATP-dependent RNA helicase, putative | 1945 | 9e-216 |
| A9P851 Predicted protein | 1940 | 3e-215 |
| A9PD17 Predicted protein | 1939 | 4e-215 |
| A5BNE8 Putative uncharacterized protein | 1937 | 7e-215 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G13920.1 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 2019 | 1e-226 |
| AT1G54270.1 EIF4A-2; ATP-dependent helicase/ translation initiation factor | 1985 | 1e-222 |
| AT3G13920.3 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 1950 | 1e-218 |
| AT3G13920.2 EIF4A1 (EUKARYOTIC TRANSLATION INITIATION FACTOR 4A1); ATP-dependent helicase/ translation initiation factor | 1908 | 9e-214 |
| AT1G72730.1 eukaryotic translation initiation factor 4A, putative / eIF-4A, putative | 1877 | 4e-210 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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