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Information for unigene UN48012

FASTA Sequence
Unigene ID: UN48012Length: 850 SSR 
GTCTCCGCCGTCTACACTCTCTCTCTCTCACTTATCATCATCAAACACACTCTCTGCTTCACAAGAAGAGCTTTCTGATTCGTCTC
TATTGTTTCTGCTTCTGGTTGATACTTTTAGCTTAAGCTCCAAGTGGATCAATATGTCAATGACGGAAGAAAGTAAGACGACGAAG
CTCGAATCGGGGGGAGACTCTTCGGATATCGAGAACGGGAACTGTAGCAGTAGCGGAAGTGGAAGTGGAGGAGGAGATACTAAGAA
GACGTGCGTTGATTGCGGAACGAACAAGACTCCTTTCTGGCGTGGTGGCCCTGCTGGTCCTAAATCATCGTGCAATGCGTGTGGGA
TCAAGAGCAGGAAGAAGAGGCAGGCAGCTCTTGGGATTAAACAAGAGGATAATAACAAGATGAAGAACAACAAAAGTAACGATAGC
TATCTCGCTCCCGACAATCAGACGGTCAAAAACGGAAAAGGCGATTCGGGAAACGTCAAGAACAAGATCAAGACGGAGACTGAGGA
TTGTAATGAGAAGAAGAGTGTGAAAAGGGGGAGTAGATTTTTGGATTTAGGATTTAAAGTGCCCGTGATGAAGAGATCGGTGGTGG
AGAAGAAGAGGGTATGGATGAAGCTGGGTGAAGAGGGACGAGCAGCAGTGCTTCTCATGGCTCTTTCTTGTGGTTGAGCTTTTTTT
TCTTCTCAACTCCCTTTTTTTGGTCGGAATGGTTTAGGAGAAGAGATTAGGGCAAATAATAAGTTAGTAAGGAAATGATGAATTTT
TTATATGTGTAATCCTTGTCTGAAGGCTAAAAGCTAATGTTATGCTACTTACTAATTAATTAATCGTTTTCACTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868160 hypothetical protein ARALYDRAFT_329901 [Arabidopsis lyrata subsp. lyrata]6642e-067
NP_188312 GATA transcription factor 17 [Arabidopsis thaliana]5243e-051
NP_680707 GATA type zinc finger transcription factor family protein [Arabidopsis thaliana]4114e-038
XP_002885174 hypothetical protein ARALYDRAFT_479155 [Arabidopsis lyrata subsp. lyrata]3622e-032
XP_002275498 PREDICTED: hypothetical protein [Vitis vinifera]2457e-019

Swiss-Prot top hits (Blast detail)Scoree value
Q9LIB5 GATA transcription factor 175241e-052
Q8LG10 GATA transcription factor 152132e-016
Q9FJ10 GATA transcription factor 162086e-016
Q9SZI6 Putative GATA transcription factor 221763e-012
Q5HZ36 GATA transcription factor 211612e-010

TrEMBL top hits (Blast detail)Scoree value
Q0WPA1 Putative uncharacterized protein At3g168705242e-051
Q8GW81 Putative uncharacterized protein At4g161414113e-038
C6T5X2 Putative uncharacterized protein2357e-018
B9N4N6 Predicted protein2322e-017
B9RZK8 GATA transcription factor, putative2285e-017

Arabidopsis top hits (Blast detail)Scoree value
AT3G16870.1 zinc finger (GATA type) family protein5241e-053
AT4G16141.1 sequence-specific DNA binding / transcription factor/ zinc ion binding4254e-042
AT3G06740.1 zinc finger (GATA type) family protein2132e-017
AT5G49300.1 zinc finger (GATA type) family protein2086e-017
AT4G26150.1 CGA1 (CYTOKININ-RESPONSIVE GATA FACTOR 1); transcription factor1763e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information