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Information for unigene UN48025

FASTA Sequence
Unigene ID: UN48025Length: 570 SSR 
AAGATGCAAACTTGTTTATGTCGAAAGATAATTATACCGTTTTACAGTTTTCTTCTTCTTCTTCTTAAAATTAAATCAACAAAACC
CAAACATACCCATTTATTGTACATTAAAACAAGTGATTAAAGGTCTCACACACGAAAACTAACCTCCCATTGCCCAAAGAGATTAT
CAAACAACAAATTCTTGAAAGAAAGAAAGAAAAAAAGCACGATAGAGAGACACTTCATTCATCAAGAGGGACATTTGAAGCCAGGT
GGTGGAGTCTTTCCACAGTCGATAAGAAGCTCAAGAGCAATGGGGATAATAAGGTCGAGGTTGAGAAGTTTGGCTTTAATGGTGGT
ACATAAACAAACGGCTGCGTCTAAGTCAACTAAACCTCCCAAAACCGGACAACACTCTTTCTTGGCGTTACTTCCACCAAGCCCGA
TGTGAATCAAACCTCCAAGAACGTCCACACAAGCGCCTAGCTTCAATGTGTCGATTGGGCAAGTTTCTGGTTTAGGTGGAGTTGGT
GTTGGTGGTGGCGGTGGGCACGGTGGAGTTGGTGTTGGTGGTGTTACGACAGGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA64425 cell wall-plasma membrane linker protein [Brassica napus]5553e-055
BAJ34557 unnamed protein product [Thellungiella halophila]5349e-053
NP_188851 cell wall-plasma membrane linker protein [Arabidopsis thaliana]4991e-048
AAD11796 cell wall-plasma membrane linker protein homolog [Arabidopsis thaliana]4991e-048
XP_002870258 hypothetical protein ARALYDRAFT_493374 [Arabidopsis lyrata subsp. lyrata]4935e-048

Swiss-Prot top hits (Blast detail)Scoree value
Q00451 36.4 kDa proline-rich protein4395e-043
P14009 14 kDa proline-rich protein DC2.152585e-022
Q01595 Cortical cell-delineating protein2479e-021

TrEMBL top hits (Blast detail)Scoree value
Q39353 Cell wall-plasma membrane linker protein5552e-055
Q9LIE9 At3g221204997e-049
Q9SET1 Cell wall-plasma membrane linker protein homolog4997e-049
O23370 Cell wall protein like4872e-047
Q67YU3 Cell wall protein like4792e-046

Arabidopsis top hits (Blast detail)Scoree value
AT3G22120.1 CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN); lipid binding5004e-051
AT4G15160.1 lipid binding / structural constituent of cell wall4871e-049
AT4G15160.2 lipid binding / structural constituent of cell wall4871e-049
AT3G22142.1 structural constituent of cell wall4243e-042
AT2G10940.1 protease inhibitor/seed storage/lipid transfer protein (LTP) family protein3472e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information