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Information for unigene UN48054

FASTA Sequence
Unigene ID: UN48054Length: 933 SSR 
AGTTCAATGCATAAGCTCCTCTGTTACCACATCATAGATCCGTGTAATGACTTTTTCATGTTTTCTTTACAAGACCCCAAACCTAT
ACAATGTTATCAGTGATAAGAGCTACGCAGCGAAAAAGAAACTGGGGGTCAATGAACCTAGTTTCAAGGGTCCATCTGCTGTTTCA
GTTACATACAAGTGGGGCTTTCACACACGATGGAGCAGAAGAGGTGAGCTCTTGCTGCACCTTAGGCTACTTGGCTGTCAAGGTGA
CTAAGTAGCCAACAACTGCTGTAGCAGTTCCAAGGATCCCACCCACAATGACCTGTGGAGGGGTATGACCTAGAAGTTCACGCAAG
GGTCTGCTTTCAGCAAGGGGATGCTCTGAAGGAAGTTCATACACAATCTGATTGAGAAGCTCAGCTTGGCGTCCAGCATGTAATCT
TACACCAGTTGCATCATACATAACAATGGAAGTGAGAATGAAAGCAATGGCGAAAAGAGATCCACTAAAGCCTTCTTGTAAACCAA
CGGCCATAGCAAGAGCCGTAACAGTTGCTGAATGCGAAGAAGGCATTCCTCCAGACCCAACAAGCCGTTTCAGATCCCATCTCTTT
TCTTTATACCAGGTGGTGAAGAACTTGATGAATTGTGCGATGGTGAAAGCTAAGACGGAGGAAAGCAGAGGGTAGTTCGTGAATAT
TGAGAAATAGTGGGAAGAAGAGGAAGAGGATTCCTCCATTAGACGATGATCGATGGATCTCATCAGGTAGAGCTTCAAATCAATCA
CGAGAGAGCTCTGCTAGAGGAAGAAGGTGACTTGAAGTTGAATCCATACGAGGAACCCTTTGCGTGTGGATAAATCTTTCTTTTTG
ATCTCTCTCTCTCTCTCTCTCTCTTTAATCGGGTCTACCGTTCAAATCATCTTTTCTTTGGTTGTTTTCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176927 Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]7215e-074
XP_002888611 hypothetical protein ARALYDRAFT_315776 [Arabidopsis lyrata subsp. lyrata]7091e-072
XP_002890712 hypothetical protein ARALYDRAFT_890238 [Arabidopsis lyrata subsp. lyrata]6858e-070
NP_564215 Acid phosphatase/vanadium-dependent haloperoxidase-related protein [Arabidopsis thaliana]6831e-069
AAM63820 unknown [Arabidopsis thaliana]6777e-069

Swiss-Prot top hits (Blast detail)Scoree value
O32107 Uncharacterized membrane protein yuiD2428e-020

TrEMBL top hits (Blast detail)Scoree value
Q9FXC5 At1g676007214e-074
B9DG97 AT1G24350 protein6831e-069
Q8LC64 Putative uncharacterized protein6775e-069
Q9CAG0 Putative uncharacterized protein F12B7.156452e-065
Q9FYM6 F21J9.16221e-062

Arabidopsis top hits (Blast detail)Scoree value
AT1G67600.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 9 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage, D bilateral stage; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24350.1); Has 627 Blast hits to 627 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 159 (source: NCBI BLink).7222e-076
AT1G24350.1 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 626 Blast hits to 626 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).6836e-072
AT1G24350.2 INVOLVED IN: biological_process unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 622 Blast hits to 622 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 154 (source: NCBI BLink).6191e-064
AT3G21610.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 626 Blast hits to 626 proteins in 204 species: Archae - 0; Bacteria - 365; Metazoa - 0; Fungi - 0; Plants - 103; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).4991e-050
AT3G21610.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67600.1); Has 610 Blast hits to 610 proteins in 200 species: Archae - 0; Bacteria - 358; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 150 (source: NCBI BLink).4221e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  40%
 
122  40%
 
181  20%

Unigene MembersMember information